CCDS Report for Consensus CDS

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Report for CCDS82994.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
82994.1	Public	Homo sapiens	5	NNT	24	110	108

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82994.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000512996.6	ENSP00000426343.1		Accepted	alive
		NCBI	NM_001331026.2	NP_001317955.1		Accepted	alive

Chromosomal Locations for CCDS 82994.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)

Genome Browser links:

Chromosome	Start	Stop
5	43615860	43616065
5	43619032	43619119
5	43624032	43624120
5	43628200	43628387
5	43644192	43644325
5	43644611	43644802
5	43645357	43645510
5	43649147	43649308
5	43650477	43650587
5	43651739	43651884
5	43653018	43653213
5	43655840	43656073
5	43656653	43656813
5	43659171	43659350
5	43675511	43675670
5	43677725	43677806
5	43700119	43700237
5	43702621	43702736
5	43704255	43704404

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2868 nt):
ATGGTTAATCCAACATTAGGTGTTCATGAAGCTGACCTTTTAAAGACATCAGGAACGCTGATTAGTTTTA TTTACCCAGCCCAAAATCCAGAGTTGCTAAATAAACTTTCCCAAAGAAAAACTACAGTTCTGGCAATGGA CCAGGTTCCAAGAGTCACAATTGCTCAGGGATATGATGCGCTAAGCTCCATGGCCAACATTGCGGGTTAT AAGGCTGTTGTCCTAGCAGCAAATCATTTTGGACGTTTTTTTACTGGTCAGATCACAGCTGCTGGAAAAG TTCCTCCAGCTAAGATTCTGATAGTTGGTGGTGGTGTTGCTGGGCTTGCTTCTGCAGGCGCAGCAAAGTC GATGGGTGCAATTGTTCGAGGATTTGACACAAGAGCTGCAGCTTTGGAACAGTTCAAGTCTCTTGGTGCT GAGCCCTTGGAGGTGGACTTGAAGGAATCTGGTGAGGGACAAGGAGGATATGCAAAAGAGATGTCCAAAG AGTTCATTGAAGCTGAAATGAAACTCTTTGCTCAACAATGCAAGGAGGTAGACATCCTTATCAGCACAGC ACTTATTCCAGGTAAAAAAGCTCCAGTTTTATTTAATAAAGAAATGATTGAGTCAATGAAGGAAGGTTCA GTTGTTGTGGATTTAGCTGCTGAGGCTGGTGGAAACTTTGAAACCACTAAGCCAGGAGAACTCTACATTC ATAAGGGAATTACTCACATAGGCTACACAGACCTGCCCAGCCGAATGGCCACTCAGGCCAGCACCCTATA TTCCAACAACATCACCAAACTCCTGAAGGCCATCAGCCCGGACAAAGATAATTTTTATTTTGATGTGAAA GATGACTTTGACTTTGGTACGATGGGTCATGTCATTAGAGGAACTGTAGTGATGAAAGATGGTAAAGTGA TTTTCCCAGCTCCCACACCGAAAAATATTCCTCAAGGTGCCCCAGTAAAACAGAAGACAGTGGCTGAGCT GGAAGCTGAAAAAGCAGCTACCATTACACCCTTCAGGAAGACAATGTCAACGGCTTCTGCATATACAGCA GGTCTCACAGGGATACTGGGTTTGGGCATTGCGGCTCCCAATCTAGCCTTTTCTCAGATGGTGACCACTT TTGGCTTGGCTGGCATTGTGGGGTATCATACCGTCTGGGGAGTGACCCCTGCTCTCCACTCACCACTGAT GTCTGTGACAAATGCAATCTCAGGGCTGACTGCAGTTGGTGGGTTGGCACTGATGGGAGGACATTTGTAT CCTTCCACAACTTCTCAGGGCCTTGCTGCTCTTGCTGCATTCATATCCTCTGTCAACATTGCAGGTGGCT TTCTGGTGACTCAGAGAATGCTGGACATGTTCAAGCGTCCCACTGACCCCCCAGAATACAACTACCTGTA CCTGCTCCCTGCCGGCACCTTTGTTGGTGGATATTTAGCTGCCCTCTACAGTGGTTATAACATTGAACAG ATCATGTACCTAGGCTCGGGTTTGTGCTGTGTCGGTGCCTTGGCTGGCCTCTCCACCCAGGGAACAGCAC GTCTTGGCAATGCACTGGGCATGATTGGGGTTGCTGGAGGACTGGCAGCCACCCTCGGAGTCCTAAAACC GGGCCCAGAATTACTAGCTCAGATGTCTGGAGCGATGGCTTTGGGTGGTACCATTGGATTGACAATTGCC AAACGCATCCAGATTTCTGATTTACCTCAATTAGTTGCTGCTTTTCACAGTTTAGTGGGTTTGGCAGCTG TACTTACTTGCATAGCTGAGTACATTATAGAATATCCACATTTTGCTACGGATGCAGCAGCAAATCTCAC CAAGATTGTGGCCTACCTCGGCACTTACATTGGTGGCGTCACCTTTAGTGGGTCTCTCATTGCCTATGGA AAATTGCAGGGTCTCCTGAAATCTGCCCCTCTCCTACTGCCTGGAAGGCACTTACTCAATGCAGGCTTAC TGGCTGCTAGTGTGGGCGGGATAATCCCATTCATGGTGGACCCAAGCTTTACTACTGGCATCACCTGTCT GGGTTCAGTGTCTGCTCTCTCTGCTGTCATGGGTGTGACTTTGACAGCTGCTATTGGGGGTGCTGACATG CCCGTCGTTATCACTGTGCTGAACAGCTACTCAGGCTGGGCCCTGTGTGCAGAGGGCTTCCTGCTCAACA ACAATCTGCTGACCATCGTGGGTGCACTCATAGGCTCGTCTGGTGCTATCCTGTCATACATCATGTGTGT GGCAATGAATCGCTCCCTGGCTAATGTGATTCTTGGAGGCTATGGCACCACTTCAACAGCTGGTGGAAAA CCCATGGAAATTTCTGGCACACATACGGAAATCAACCTTGACAATGCAATTGACATGATTCGAGAAGCTA ATAGCATTATTATTACACCAGGCTATGGTCTCTGTGCAGCCAAAGCTCAATACCCCATTGCTGATTTGGT AAAGATGCTCACTGAGCAAGGCAAAAAAGTCAGGTTTGGAATTCACCCAGTTGCAGGCCGAATGCCTGGT CAGCTTAATGTGCTGCTGGCTGAGGCTGGTGTGCCATATGACATTGTGTTGGAAATGGATGAGATCAACC ATGATTTTCCAGATACTGATTTGGTCCTTGTAATTGGAGCTAATGACACTGTTAATTCAGCAGCTCAAGA AGATCCCAACTCTATTATTGCAGGCATGCCAGTCCTTGAGGTCTGGAAATCAAAGCAGGTGATTGTTATG AAGAGGTCTTTGGGTGTTGGCTATGCTGCAGTGGACAATCCAATCTTCTACAAACCTAACACGGCCATGC TTCTAGGTGATGCCAAGAAAACATGTGACGCGCTCCAGGCGAAAGTTAGAGAATCCTATCAGAAGTAA
Translation (955 aa):
MVNPTLGVHEADLLKTSGTLISFIYPAQNPELLNKLSQRKTTVLAMDQVPRVTIAQGYDALSSMANIAGY KAVVLAANHFGRFFTGQITAAGKVPPAKILIVGGGVAGLASAGAAKSMGAIVRGFDTRAAALEQFKSLGA EPLEVDLKESGEGQGGYAKEMSKEFIEAEMKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGS VVVDLAAEAGGNFETTKPGELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISPDKDNFYFDVK DDFDFGTMGHVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAEKAATITPFRKTMSTASAYTA GLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGLTAVGGLALMGGHLY PSTTSQGLAALAAFISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLLPAGTFVGGYLAALYSGYNIEQ IMYLGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLAATLGVLKPGPELLAQMSGAMALGGTIGLTIA KRIQISDLPQLVAAFHSLVGLAAVLTCIAEYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYG KLQGLLKSAPLLLPGRHLLNAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADM PVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGGK PMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPVAGRMPG QLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVM KRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKVRESYQK

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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