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Report for CCDS83276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83276.1 Public Homo sapiens 8 TTI2 24 110 108 CCDS HistoryNCBI Gene:80185Re-query CCDS DB by CCDS ID:83276.1Re-query CCDS DB by GeneID:80185See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83276.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000520636.5 ENSP00000428401.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520636.5Link to Ensembl Protein Viewer:ENSP00000428401.1Re-query CCDS DB by Nucleotide ID:ENST00000520636Re-query CCDS DB by Protein ID:ENSP00000428401
Original member Current member NCBI NM_001330505.3 NP_001317434.1 Accepted alive Link to Nucleotide Sequence:NM_001330505.3Link to Protein Sequence:NP_001317434.1Re-query CCDS DB by Nucleotide ID:NM_001330505Re-query CCDS DB by Protein ID:NP_001317434Link to BLAST:NP_001317434.1

Chromosomal Locations for CCDS 83276.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 33499173 33499277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33500328 33500490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33503429 33503572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33503748 33503935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33509746 33509932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33511967 33512613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1434 nt):
ATGGAGCTTGACAGCGCTCTGGAAGCCCCATCGCAGGAAGACTCTAATTTGTCCGAGGAGTTGTCTCACT
CCGCCTTTGGACAGGCCTTCTCCAAGATTTTACACTGTCTTGCCCGCCCGGAGGCACGACGAGGCAATGT
AAAAGATGCAGTTCTTAAAGACCTCGGTGATCTAATAGAAGCCACAGAATTTGATAGGTTATTTGAGGGG
ACTGGTGCACGGCTCCGCGGAATGCCGGAGACACTGGGGCAGGTAGCAAAAGCCCTGGAGAAGTATGCAG
CCCCCTCCAAGGAGGAGGAAGGTGGAGGTGATGGGCACTCCGAAGCGGCCGAGAAAGCAGCCCAAGTTGG
GTTACTGTTTCTTAAACTGTTAGGGAAAGTTGAGACTGCTAAGAATTCCCTGGTCGGCCCTGCATGGCAG
ACGGGCCTGCATCACTTGGCAGGACCCGTTTATATTTTTGCCATCACACACAGCTTGGAGCAACCATGGA
CCACTCCGAGATCTCGGGAAGTTGCTAGGGAGGTGCTCACCTCACTGCTTCAAGTTACTGAATGCGGTTC
TGTGGCAGGATTCCTACATGGAGAAAATGAAGATGAGAAAGGGAGACTTTCGGTGATACTAGGGCTTCTC
AAACCCGACTTGTATAAGGAATCCTGGAAGAATAACCCTGCCATCAAACATGTTTTCTCATGGACTCTGC
AACAGGTCACTCGGCCCTGGCTGAGCCAGCATCTGGAAAGGGTACTTCCCGCATCATTGGTCATTTCAGA
TGACTATCAGACTGAGAACAAAATCCTGGGTGTACACTGTCTCCATCACATTGTGCTTAATGTGGCTGTG
CTCCTGTGTCTGCTGGATTTATTCCCCATCCTGGAGAAAACCCTGCACTGGAAAGGAGATGGAGCTCGAC
CCACCACCCATTGTGATGAGGTCCTGCGGCTGATCCTGACCCACATGGAGCCAGAGCACCGCCTTCTTTT
ACGCAGGACCTACGCAAGAAACCTGCCGGCTTTCGTGAACAGGTTGGGGATCCTAACTGTCCGGCACTTA
AAGAGGCTGGAGAGAGTCATCATTGGTTATCTGGAGGTTTATGATGGACCTGAGGAGGAAGCTAGACTGA
AGATATTGGAAACCCTAAAACTTCTCATGCAACATACTTGGCCCAGAGTTTCCTGCAGACTTGTGGTCTT
ACTGAAGGCCCTCTTGAAACTGATTTGTGATGTAGCAAGGGATCCAAACCTTACACCTGAGTCTGTTAAG
AGCGCCCTGCTACAGGAGGCCACAGACTGCCTGATTCTCCTGGACCGCTGTTCTCAAGGACGGGTAAAGG
GTCTCCTGGCCAAAATTCCCCAAAGCTGTGAAGACAGAAAAGTGGTGAACTATATCAGAAAAGTGCAGCA
GGTTTCTGAAGGCGCACCCTACAATGGAACTTAA

Translation (477 aa):
MELDSALEAPSQEDSNLSEELSHSAFGQAFSKILHCLARPEARRGNVKDAVLKDLGDLIEATEFDRLFEG
TGARLRGMPETLGQVAKALEKYAAPSKEEEGGGDGHSEAAEKAAQVGLLFLKLLGKVETAKNSLVGPAWQ
TGLHHLAGPVYIFAITHSLEQPWTTPRSREVAREVLTSLLQVTECGSVAGFLHGENEDEKGRLSVILGLL
KPDLYKESWKNNPAIKHVFSWTLQQVTRPWLSQHLERVLPASLVISDDYQTENKILGVHCLHHIVLNVAV
LLCLLDLFPILEKTLHWKGDGARPTTHCDEVLRLILTHMEPEHRLLLRRTYARNLPAFVNRLGILTVRHL
KRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTWPRVSCRLVVLLKALLKLICDVARDPNLTPESVK
SALLQEATDCLILLDRCSQGRVKGLLAKIPQSCEDRKVVNYIRKVQQVSEGAPYNGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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