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Report for CCDS83294.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83294.1 Public Homo sapiens 8 CHCHD7 24 110 108 CCDS HistoryNCBI Gene:79145Re-query CCDS DB by CCDS ID:83294.1Re-query CCDS DB by GeneID:79145See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83294.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523061.5 ENSP00000430882.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523061.5Link to Ensembl Protein Viewer:ENSP00000430882.1Re-query CCDS DB by Nucleotide ID:ENST00000523061Re-query CCDS DB by Protein ID:ENSP00000430882
Original member Current member NCBI NM_001317859.2 NP_001304788.1 Accepted alive Link to Nucleotide Sequence:NM_001317859.2Link to Protein Sequence:NP_001304788.1Re-query CCDS DB by Nucleotide ID:NM_001317859Re-query CCDS DB by Protein ID:NP_001304788Link to BLAST:NP_001304788.1

Chromosomal Locations for CCDS 83294.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 56214614 56214667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 56216433 56216506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 56217331 56217343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (141 nt):
ATGCCCTCGGTAACACAGAGGCTGAGAGATCCTGACATAAATCCTTGTTTGTCGGAATCTGATGCTTCCA
CCAGATGTCTGGATGAAAATAACTATGACAGGGAAAGGTGTTCCACTTACTTCTTGAGAATTCTATCGTG
A

Translation (46 aa):
MPSVTQRLRDPDINPCLSESDASTRCLDENNYDRERCSTYFLRILS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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