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Report for CCDS83391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83391.1 Public Homo sapiens 9 FSD1L 24 110 108 CCDS HistoryNCBI Gene:83856Re-query CCDS DB by CCDS ID:83391.1Re-query CCDS DB by GeneID:83856See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394926.7 ENSP00000378384.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394926.7Link to Ensembl Protein Viewer:ENSP00000378384.3Re-query CCDS DB by Nucleotide ID:ENST00000394926Re-query CCDS DB by Protein ID:ENSP00000378384
Original member Current member NCBI NM_001330739.2 NP_001317668.1 Accepted alive Link to Nucleotide Sequence:NM_001330739.2Link to Protein Sequence:NP_001317668.1Re-query CCDS DB by Nucleotide ID:NM_001330739Re-query CCDS DB by Protein ID:NP_001317668Link to BLAST:NP_001317668.1

Chromosomal Locations for CCDS 83391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 105448221 105448235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105464236 105464331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105468193 105468324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105471904 105472005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105479354 105479376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105484381 105484502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105506399 105506608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105508617 105508715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105512807 105512936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105513599 105513631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105534493 105534593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105535067 105535318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105539263 105539351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105546358 105546483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1530 nt):
ATGGACTCCCAGAAAGAAGCTCTACAGAGGATCATTTCAACTCTGGCAAATAAAAATGATGAAATTCAGA
ACTTTATTGATACACTACATCATACACTAAAAGGAGTTCAGGAAAATTCGTCCAACATACTCTCAGAGTT
AGATGAAGAATTTGATAGTTTATACTCTATACTGGATGAAGTAAAAGAAAGTATGATTAACTGTATCAAG
CAGGAACAAGCTCGTAAATCCCAAGAGTTACAGAGTCAGATTAGTCAATGTAATAATGCCCTGGAGAACT
CTGAAGAACTATTAGAATTTGCAACAAGGTCATTAGATATAAAGGAACCTGAAGAATTTTCAAAGGCTGC
CAGACAGATCAAGGATAGAGTCACAATGGCTTCAGCCTTTCGCCTTTCTTTGAAACCAAAGGTCAGTGAC
AACATGACTCATTTAATGGTGGATTTCTCACAGGAAAGACAGATGCTGCAAACTTTGAAGTTTTTGCCAG
TCCCCAAAGCTCCAGAGATAGATCCAGTAGAGTGTTTGGTGGCAGATAACTCTGTAACAGTGGCTTGGAG
AATGCCAGAAGAAGATAATAAGATTGACCATTTTATACTGGAACATAGGAAGACTAATTTTGATGGACTT
CCACGTGTAAAGGATGAGCGATGCTGGGAGATAATTGATAATATTAAGGGTACTGAATATACACTATCAG
GCTTAAAATTTGATTCAAAGTATATGAATTTCAGAGTGCGAGCTTGTAACAAGGCTGTGGCTGGAGAGTA
TTCTGATCCAGTGACTCTAGAGACCAAAGCACTTAACTTCAATTTGGATAACTCCTCATCCCATTTGAAC
CTGAAAGTTGAAGATACATGTGTAGAGTGGGATCCTACTGGAGGAAAAGGTCAAGAAAGTAAAATTAAAG
GAAAAGAGAACAAGGGCAGTGTCCATGTTACTTCACTGAAGAAACATACAAGAAGTGGTACACCATCCCC
AAAACGAACATCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGCAGTAGAGATCGTTTTACTGGAGAATCA
TACACAGTGCTGGGAGACACTGCTATTGAAAGTGGACAACATTATTGGGAGGTCAAGGCCCAGAAGGATT
GTAAATCCTACAGTGTGGGAGTAGCATACAAAACGTTGGGGAAATTTGACCAATTGGGAAAGACAAACAC
TAGTTGGTGTATCCATGTCAACAACTGGCTACAAAACACATTTGCAGCAAAGCATAATAATAAAGTCAAA
GCTTTGGATGTTACTGTTCCTGAAAAAATAGGTGTATTTTGTGATTTTGATGGGGGTCAACTTTCATTCT
ATGATGCAAATTCTAAACAGTTGCTATATTCCTTTAAGACAAAATTTACTCAGCCAGTACTACCTGGTTT
CATGGTATGGTGTGGTGGACTTTCTTTGAGTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACACTTCAG
AAAAGTGAAAATGGAATGACTGGTTCAGCTAGCAGCCTGAACAATGTTGTTACTCAATAG

Translation (509 aa):
MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKESMINCIK
QEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKAARQIKDRVTMASAFRLSLKPKVSD
NMTHLMVDFSQERQMLQTLKFLPVPKAPEIDPVECLVADNSVTVAWRMPEEDNKIDHFILEHRKTNFDGL
PRVKDERCWEIIDNIKGTEYTLSGLKFDSKYMNFRVRACNKAVAGEYSDPVTLETKALNFNLDNSSSHLN
LKVEDTCVEWDPTGGKGQESKIKGKENKGSVHVTSLKKHTRSGTPSPKRTSVGSRPPAVRGSRDRFTGES
YTVLGDTAIESGQHYWEVKAQKDCKSYSVGVAYKTLGKFDQLGKTNTSWCIHVNNWLQNTFAAKHNNKVK
ALDVTVPEKIGVFCDFDGGQLSFYDANSKQLLYSFKTKFTQPVLPGFMVWCGGLSLSTGMQVPSAVRTLQ
KSENGMTGSASSLNNVVTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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