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Report for CCDS83405.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83405.1 Public Homo sapiens 9 TMEM268 24 110 108 CCDS HistoryNCBI Gene:203197Re-query CCDS DB by CCDS ID:83405.1Re-query CCDS DB by GeneID:203197See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83405.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374049.4 ENSP00000363161.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374049.4Link to Ensembl Protein Viewer:ENSP00000363161.4Re-query CCDS DB by Nucleotide ID:ENST00000374049Re-query CCDS DB by Protein ID:ENSP00000363161
Original member Current member NCBI NM_001330760.2 NP_001317689.1 Accepted alive Link to Nucleotide Sequence:NM_001330760.2Link to Protein Sequence:NP_001317689.1Re-query CCDS DB by Nucleotide ID:NM_001330760Re-query CCDS DB by Protein ID:NP_001317689Link to BLAST:NP_001317689.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317689.1 343 Q5VZI3-3 343 100% 0 0

Chromosomal Locations for CCDS 83405.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 114617196 114617301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114624350 114624459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114626896 114627006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114628101 114628250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114633768 114633878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114636990 114637070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114638544 114638726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114643134 114643313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGGCCTGTGAACCACAGGTGGACCCGGGGGCCACTGGCCCATTGCCCCCCTCCTCCCCTGGCTGGAGTG
CCCTGCCTGGAGGGAGCCCTCCTGGCTGGGGGCAAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCG
GATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGC
ATCCAGCAGGTCCCGGCTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAA
GATATATCATCTACAACTCGAGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGC
CAATATCTACTCTACCAGTCAGATGTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTG
GCCGCGGTGAGCCTGACCTTGACTCTTGTGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACA
CGGACCTGAGGCTGGCAGCTGCCAATGGAGCCCTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACAC
AGTGGAAGGATGCCAGAGTGTGATTCAGCTTTGGTTTGTCTACTTCGACCTGGAGAACTGTGTGCAGTTT
TTGTCTGATCATGTTCAAGAAATGAAGACTAGCCAAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGT
GTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGGCCTGAGAACTTGGAGGATGCTCCTCT
CCTGCCCGGCAATTCTTGTCCTAACGAGAGGCCACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAG
GCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTGGCAGTGTTTGGCGGCTACTACATCCGGCTTCTAGTGA
CCTCCCAGCTCCCTCAGGCAATGGGGACACGACACACGAACTCTCCGAGAATTCCATGCCCCTGCCAGCT
CATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCCTGGCGAGGTGA

Translation (343 aa):
MACEPQVDPGATGPLPPSSPGWSALPGGSPPGWGQELHNGQVLTVLRIDNTCAPISFDLGAAEEQLQTWG
IQQVPADQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVVVWANIYSTSQMFALGNHWAGMLLVTL
AAVSLTLTLVLVFERHQKKANTNTDLRLAAANGALLRHRVLLGVTDTVEGCQSVIQLWFVYFDLENCVQF
LSDHVQEMKTSQESLLRSRLSQLCVVMETGVSPATAEGPENLEDAPLLPGNSCPNERPLMQTELHQLVPE
AEPEEMARQLLAVFGGYYIRLLVTSQLPQAMGTRHTNSPRIPCPCQLIEAYILGTGCCPFLAR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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