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Report for CCDS83460.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83460.1 Public Homo sapiens X ACOT9 24 110 108 CCDS HistoryNCBI Gene:23597Re-query CCDS DB by CCDS ID:83460.1Re-query CCDS DB by GeneID:23597See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83460.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379295.5 ENSP00000368597.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000379295.5Link to Ensembl Protein Viewer:ENSP00000368597.1Re-query CCDS DB by Nucleotide ID:ENST00000379295Re-query CCDS DB by Protein ID:ENSP00000368597
Original member Current member NCBI NM_001330259.2 NP_001317188.1 Accepted alive Link to Nucleotide Sequence:NM_001330259.2Link to Protein Sequence:NP_001317188.1Re-query CCDS DB by Nucleotide ID:NM_001330259Re-query CCDS DB by Protein ID:NP_001317188Link to BLAST:NP_001317188.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317188.1 379 Q9Y305-3 379 100% 0 0

Chromosomal Locations for CCDS 83460.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 23703894 23703982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23704694 23704844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23704993 23705080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23705509 23705594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23705768 23705858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23706628 23706739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23707877 23707944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23713135 23713208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23721881 23721984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23722670 23722753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23730527 23730564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23730816 23730970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1140 nt):
ATGGAAGAAAGGAAATTACTTCATAGTTTCTTGGCTAAATCACAGGATGGACTGCCTCCTAGGAGAATGA
AGGACAGTTATATTGAAGTTCTCTTGCCTTTGGGCAGTGAGCCTGAATTACGAGAGAAATATTTGACTGT
TCAAAACACCGTAAGATTTGGCAGGATTCTTGAGGATCTTGACAGCTTGGGAGTTCTTATTTGTTACATG
CACAACAAAATCCACTCCGCCAAGATGTCTCCTTTATCGATAGTTACAGCCCTGGTGGATAAGATTGATA
TGTGTAAGAAGAGCTTGAGCCCAGAACAGGACATTAAGTTCAGTGGCCATGTTAGCTGGGTCGGGAAGAC
ATCCATGGAAGTGAAGATGCAAATGTTCCAGTTACATGGTGATGAATTTTGTCCTGTTTTGGATGCAACA
TTTGTAATGGTGGCTCGTGATTCTGAAAATAAAGGGCCGGCATTTGTAAATCCACTCATCCCTGAAAGCC
CAGAGGAAGAGGAGCTCTTTAGACAAGGGGAATTGAACAAGGGGAGAAGAATTGCCTTCAGCTCCACGTC
GTTACTGAAAATGGCCCCCAGCGCTGAGGAGAGGACCACCATACATGAGATGTTTCTCAGCACACTGGAT
CCAAAGACTATAAGTTTTCGGAGTCGAGTTTTACCCTCTAATGCAGTGTGGATGGAGAATTCAAAACTGA
AGAGTTTGGAAATTTGCCACCCTCAGGAGCGGAACATTTTCAATCGGATCTTTGGTGGTTTCCTTATGAG
GAAGGCATATGAACTTGCGTGGGCTACTGCTTGTAGCTTTGGTGGTTCTCGACCGTTTGTGGTAGCAGTA
GATGACATCATGTTTCAGAAACCTGTTGAGGTTGGCTCATTGCTCTTTCTTTCTTCACAGGTATGCTTTA
CTCAGAATAATTATATTCAAGTCAGAGTACACAGTGAAGTGGCCTCCCTGCAGGAGAAGCAGCATACAAC
CACCAATGTCTTTCATTTCACGTTCATGTCGGAAAAAGAAGTGCCATTGGTTTTCCCAAAAACATATGGA
GAGTCCATGTTGTACTTAGATGGGCAGCGGCATTTCAACTCCATGAGTGGCCCAGCGACCTTGAGAAAGG
ACTACCTTGTGGAGCCCTAA

Translation (379 aa):
MEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLGSEPELREKYLTVQNTVRFGRILEDLDSLGVLICYM
HNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLDAT
FVMVARDSENKGPAFVNPLIPESPEEEELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLD
PKTISFRSRVLPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAV
DDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYG
ESMLYLDGQRHFNSMSGPATLRKDYLVEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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