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Report for CCDS83461.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83461.1 Public Homo sapiens X ZFX 24 110 108 CCDS HistoryNCBI Gene:7543Re-query CCDS DB by CCDS ID:83461.1Re-query CCDS DB by GeneID:7543See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 83461.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379188.7 ENSP00000368486.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000379188.7Link to Ensembl Protein Viewer:ENSP00000368486.4Re-query CCDS DB by Nucleotide ID:ENST00000379188Re-query CCDS DB by Protein ID:ENSP00000368486
Original member Current member NCBI NM_001330327.2 NP_001317256.1 Accepted alive Link to Nucleotide Sequence:NM_001330327.2Link to Protein Sequence:NP_001317256.1Re-query CCDS DB by Nucleotide ID:NM_001330327Re-query CCDS DB by Protein ID:NP_001317256Link to BLAST:NP_001317256.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317256.1 844 P17010-3 844 100% 0 0

Chromosomal Locations for CCDS 83461.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 24172743 24172800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24173607 24173723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24179183 24179770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24207326 24207475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24207712 24207855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24208218 24208370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24208900 24209040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24210193 24211376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2535 nt):
ATGGATGAAGATGGGCTTGAATTACAACAAGAGCCAAACTCATTTTTTGATGCAACAGACAGGGTCTCGT
TCTGTCACCCAGGCTGGAGCACAGTGGCGCCATCTGGGTCCACTGCAACCTCCGCCTCCCAGGCTCAAGT
GATCTGCTCAGCTTCCCGAGTAACTGGGGCTACAGGAGCTGATGGTACACACATGGATGGTGATCAAATT
GTTGTGGAAGTACAAGAAACTGTTTTTGTTTCAGATGTTGTGGATTCAGACATAACTGTGCATAACTTTG
TTCCTGATGACCCAGATTCAGTTGTAATCCAAGATGTTATTGAGGACGTTGTTATAGAAGATGTTCAGTG
CCCAGATATCATGGAAGAAGCAGATGTGTCTGAAACGGTCATCATTCCTGAGCAAGTGCTGGACTCAGAT
GTAACTGAAGAAGTTTCTTTAGCACATTGCACAGTCCCAGATGATGTTTTAGCTTCTGACATTACTTCAG
CCTCAATGTCTATGCCAGAACACGTCTTGACGGGTGATTCTATACATGTGTCTGACGTTGGACATGTTGG
ACATGTTGGACATGTTGAACATGTGGTTCATGATAGTGTAGTGGAAGCAGAAATTGTCACTGATCCTCTG
ACTACCGACGTAGTTTCAGAAGAAGTATTGGTAGCAGACTGTGCCTCTGAAGCAGTCATAGATGCCAATG
GGATCCCTGTGGACCAGCAGGATGATGACAAAGGCAACTGTGAGGACTACCTTATGATTTCCTTGGATGA
TGCTGGCAAAATAGAACACGATGGTTCTTCTGGAATGACCATGGACACAGAGTCGGAAATTGATCCTTGT
AAAGTGGATGGCACTTGCCCTGAGGTCATCAAGGTGTACATTTTTAAAGCTGACCCTGGAGAAGATGACT
TAGGTGGAACTGTAGACATTGTGGAGAGTGAGCCTGAGAATGATCATGGAGTTGAACTGCTTGATCAGAA
CAGCAGTATTCGTGTTCCCAGGGAAAAGATGGTTTATATGACTGTCAATGACTCTCAGCCAGAAGATGAA
GATTTAAATGTTGCTGAAATCGCTGACGAAGTTTATATGGAAGTGATCGTAGGAGAGGAGGATGCTGCAG
CAGCAGCGGCAGCCGCCGCCGTGCACGAGCAGCAAATGGATGACAATGAAATCAAAACCTTCATGCCGAT
TGCATGGGCAGCAGCTTATGGTAATAATTCTGATGGAATTGAAAACCGGAATGGCACTGCAAGTGCCCTC
TTGCACATAGATGAGTCTGCTGGCCTCGGCAGACTGGCTAAACAAAAACCAAAGAAAAGGAGAAGACCTG
ATTCCAGGCAGTACCAAACAGCAATAATTATTGGCCCTGATGGACATCCTTTGACTGTCTATCCTTGCAT
GATTTGTGGGAAGAAGTTTAAGTCGAGAGGTTTTTTGAAAAGGCACATGAAAAACCATCCCGAACACCTT
GCCAAGAAGAAATACCGCTGTACTGACTGTGATTACACTACCAACAAGAAGATAAGTTTACACAACCACC
TGGAGAGCCACAAGCTGACCAGCAAGGCAGAGAAGGCCATTGAATGCGATGAGTGTGGGAAGCATTTCTC
TCATGCAGGGGCTTTGTTTACTCACAAAATGGTGCATAAGGAAAAAGGAGCCAACAAAATGCACAAGTGT
AAATTCTGTGAATACGAGACAGCTGAACAAGGGTTATTGAATCGCCACCTCTTGGCAGTCCACAGCAAGA
ACTTTCCTCATATTTGTGTGGAGTGTGGTAAGGGTTTTCGTCACCCGTCAGAGCTCAAAAAGCACATGAG
AATCCATACTGGGGAGAAGCCGTACCAATGCCAGTACTGCGAATATAGGTCTGCAGACTCTTCTAACTTG
AAAACGCATGTCAAAACTAAGCATAGTAAAGAGATGCCATTCAAGTGTGACATTTGTCTTCTGACTTTCT
CGGATACCAAAGAGGTGCAGCAACATGCTCTTATCCACCAAGAAAGCAAAACACACCAGTGTTTGCATTG
CGACCACAAGAGTTCGAACTCAAGTGATTTGAAACGACACATAATTTCAGTTCACACGAAAGACTACCCC
CATAAGTGTGACATGTGTGATAAAGGCTTTCACAGGCCTTCAGAACTCAAGAAACACGTGGCTGCCCACA
AGGGCAAAAAAATGCACCAGTGTAGACATTGTGACTTTAAGATTGCAGATCCATTTGTTCTAAGTCGCCA
TATTCTCTCAGTTCACACAAAGGATCTTCCATTTAGGTGCAAGAGATGTAGAAAGGGATTTAGGCAACAG
AGTGAGCTTAAAAAGCATATGAAGACACACAGTGGCAGGAAAGTGTATCAGTGTGAGTACTGTGAGTATA
GCACTACAGATGCCTCAGGCTTTAAACGGCACGTTATTTCCATTCACACGAAAGACTATCCTCACCGGTG
TGAGTACTGCAAGAAAGGCTTCCGAAGACCTTCAGAAAAGAACCAGCACATAATGCGACATCATAAAGAA
GTTGGCCTGCCCTAA

Translation (844 aa):
MDEDGLELQQEPNSFFDATDRVSFCHPGWSTVAPSGSTATSASQAQVICSASRVTGATGADGTHMDGDQI
VVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVQCPDIMEEADVSETVIIPEQVLDSD
VTEEVSLAHCTVPDDVLASDITSASMSMPEHVLTGDSIHVSDVGHVGHVGHVEHVVHDSVVEAEIVTDPL
TTDVVSEEVLVADCASEAVIDANGIPVDQQDDDKGNCEDYLMISLDDAGKIEHDGSSGMTMDTESEIDPC
KVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVNDSQPEDE
DLNVAEIADEVYMEVIVGEEDAAAAAAAAAVHEQQMDDNEIKTFMPIAWAAAYGNNSDGIENRNGTASAL
LHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHL
AKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKC
KFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNL
KTHVKTKHSKEMPFKCDICLLTFSDTKEVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYP
HKCDMCDKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQ
SELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKE
VGLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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