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Report for CCDS83480.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83480.1 Public Homo sapiens X RPS6KA6 24 110 108 CCDS HistoryNCBI Gene:27330Re-query CCDS DB by CCDS ID:83480.1Re-query CCDS DB by GeneID:27330See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 83480.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000620340.4 ENSP00000483896.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620340.4Link to Ensembl Protein Viewer:ENSP00000483896.1Re-query CCDS DB by Nucleotide ID:ENST00000620340Re-query CCDS DB by Protein ID:ENSP00000483896
Original member Current member NCBI NM_001330512.1 NP_001317441.1 Accepted alive Link to Nucleotide Sequence:NM_001330512.1Link to Protein Sequence:NP_001317441.1Re-query CCDS DB by Nucleotide ID:NM_001330512Re-query CCDS DB by Protein ID:NP_001317441Link to BLAST:NP_001317441.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317441.1 745 Q9UK32-2 745 100% 0 0

Chromosomal Locations for CCDS 83480.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 84064277 84064402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84064971 84065111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84096194 84096311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84097772 84097848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84102037 84102198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84104499 84104657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84105787 84105876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84106365 84106487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84106910 84107040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84107623 84107725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84116229 84116287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84117060 84117148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84117384 84117454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84119885 84120027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84134782 84134819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84135104 84135210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84145478 84145557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84146978 84147058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84148042 84148123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84156075 84156191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84164328 84164387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 84186061 84186141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGGGTCTCTCTACCTCAGCAATTTGGAAAAATACTCGAGTGGAAATTGTTAATCCCTATGAAGTAAAAC
GAAAGGTGAAGGTAAATGGTCTTAAAATGGTTGATGAGCCAATGGAAGAGGGAGAAGCAGATTCTTGTCA
TGATGAAGGAGTTGTTAAAGAAATCCCTATTACTCATCATGTTAAGGAAGGCTATGAGAAAGCAGATCCT
GCACAGTTTGAGTTGCTCAAGGTTCTTGGTCAGGGGTCATTTGGAAAGGTTTTTCTTGTTAGAAAGAAGA
CCGGTCCTGATGCTGGGCAGCTCTATGCAATGAAGGTGTTAAAAAAAGCCTCTTTAAAAGTTCGAGACAG
AGTTCGGACAAAGATGGAGAGGGATATACTGGTGGAAGTAAATCATCCATTTATTGTCAAATTGCACTAT
GCCTTTCAGACTGAAGGGAAACTGTACTTAATACTGGATTTTCTCAGGGGAGGAGATGTTTTCACAAGAT
TATCCAAAGAGGTTCTGTTTACAGAGGAAGATGTGAAATTCTACCTCGCAGAACTGGCCCTTGCTTTGGA
TCATCTGCACCAATTAGGAATTGTTTATAGAGACCTGAAGCCAGAAAACATTTTGCTTGATGAAATAGGA
CATATCAAATTAACAGATTTTGGACTCAGCAAGGAGTCAGTAGATCAAGAAAAGAAGGCTTACTCATTTT
GTGGTACAGTAGAGTATATGGCTCCTGAAGTAGTAAATAGGAGAGGCCATTCCCAGAGTGCTGATTGGTG
GTCATATGGTGTTCTTATGTTTGAAATGCTTACTGGTACTCTGCCATTTCAAGGTAAAGACAGAAATGAG
ACCATGAATATGATATTAAAAGCAAAACTTGGAATGCCTCAATTTCTTAGTGCTGAAGCACAAAGTCTTC
TAAGGATGTTATTCAAAAGGAATCCAGCAAATAGATTGGGATCAGAAGGAGTTGAAGAAATCAAAAGACA
TCTGTTTTTTGCAAATATTGACTGGGATAAATTATATAAAAGAGAAGTTCAACCTCCTTTCAAACCTGCT
TCTGGAAAACCAGATGATACTTTTTGTTTTGATCCTGAATTTACTGCAAAAACACCTAAAGATTCTCCCG
GTTTGCCAGCCAGTGCAAATGCTCATCAGCTCTTCAAAGGATTCAGCTTTGTTGCAACTTCTATTGCAGA
AGAATATAAAATCACTCCTATCACAAGTGCAAATGTATTACCAATTGTTCAGATAAATGGAAATGCTGCA
CAATTTGGTGAAGTATATGAATTGAAGGAGGATATTGGTGTTGGCTCCTACTCTGTTTGCAAGCGATGCA
TACATGCAACTACCAACATGGAATTTGCAGTGAAGATCATTGACAAAAGTAAGCGAGACCCTTCAGAAGA
GATTGAAATATTGATGCGCTATGGACAACATCCCAACATTATTACTTTGAAGGATGTCTTTGATGATGGT
AGATATGTTTACCTTGTTACGGATTTAATGAAAGGAGGAGAGTTACTTGACCGTATTCTCAAACAAAAAT
GTTTCTCGGAACGGGAGGCTAGTGATATACTATATGTAATAAGTAAGACAGTTGACTATCTTCATTGTCA
AGGAGTTGTTCATCGTGATCTTAAACCTAGTAATATTTTATACATGGATGAATCAGCCAGTGCAGATTCA
ATCAGGATATGTGATTTTGGGTTTGCAAAACAACTTCGAGGAGAAAATGGACTTCTCTTAACTCCATGCT
ACACTGCAAACTTTGTTGCACCTGAGGTTCTTATGCAACAGGGATATGATGCTGCTTGTGATATCTGGAG
TTTAGGAGTCCTTTTTTACACAATGTTGGCTGGCTACACTCCATTTGCTAATGGCCCCAATGATACTCCT
GAAGAGATACTGCTGCGTATAGGCAATGGAAAATTCTCTTTGAGTGGTGGAAACTGGGACAATATTTCAG
ACGGAGCAAAGGATTTGCTTTCCCATATGCTTCATATGGACCCACATCAGCGGTATACTGCTGAACAAAT
ATTAAAGCACTCATGGATAACTCACAGAGACCAGTTGCCAAATGATCAGCCAAAGAGAAATGATGTGTCA
CATGTTGTTAAGGGAGCAATGGTTGCAACATACTCTGCCCTGACTCACAAGACCTTTCAACCAGTCCTAG
AGCCTGTAGCTGCTTCAAGCTTAGCCCAGCGACGGAGCATGAAAAAGCGAACATCAACTGGCCTGTAA

Translation (745 aa):
MGLSTSAIWKNTRVEIVNPYEVKRKVKVNGLKMVDEPMEEGEADSCHDEGVVKEIPITHHVKEGYEKADP
AQFELLKVLGQGSFGKVFLVRKKTGPDAGQLYAMKVLKKASLKVRDRVRTKMERDILVEVNHPFIVKLHY
AFQTEGKLYLILDFLRGGDVFTRLSKEVLFTEEDVKFYLAELALALDHLHQLGIVYRDLKPENILLDEIG
HIKLTDFGLSKESVDQEKKAYSFCGTVEYMAPEVVNRRGHSQSADWWSYGVLMFEMLTGTLPFQGKDRNE
TMNMILKAKLGMPQFLSAEAQSLLRMLFKRNPANRLGSEGVEEIKRHLFFANIDWDKLYKREVQPPFKPA
SGKPDDTFCFDPEFTAKTPKDSPGLPASANAHQLFKGFSFVATSIAEEYKITPITSANVLPIVQINGNAA
QFGEVYELKEDIGVGSYSVCKRCIHATTNMEFAVKIIDKSKRDPSEEIEILMRYGQHPNIITLKDVFDDG
RYVYLVTDLMKGGELLDRILKQKCFSEREASDILYVISKTVDYLHCQGVVHRDLKPSNILYMDESASADS
IRICDFGFAKQLRGENGLLLTPCYTANFVAPEVLMQQGYDAACDIWSLGVLFYTMLAGYTPFANGPNDTP
EEILLRIGNGKFSLSGGNWDNISDGAKDLLSHMLHMDPHQRYTAEQILKHSWITHRDQLPNDQPKRNDVS
HVVKGAMVATYSALTHKTFQPVLEPVAASSLAQRRSMKKRTSTGL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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