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Report for CCDS8445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8445.1 Public Homo sapiens 11 VWA5A 24 110 108 CCDS HistoryNCBI Gene:4013Re-query CCDS DB by CCDS ID:8445.1Re-query CCDS DB by GeneID:4013See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8445.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361352.9 ENSP00000355070.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361352.9Link to Ensembl Protein Viewer:ENSP00000355070.5Re-query CCDS DB by Nucleotide ID:ENST00000361352Re-query CCDS DB by Protein ID:ENSP00000355070
Original member Current member EBI ENST00000449321.5 ENSP00000404683.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000449321.5Link to Ensembl Protein Viewer:ENSP00000404683.1Re-query CCDS DB by Nucleotide ID:ENST00000449321Re-query CCDS DB by Protein ID:ENSP00000404683
Original member Current member NCBI NM_198315.3 NP_938057.1 Accepted alive Link to Nucleotide Sequence:NM_198315.3Link to Protein Sequence:NP_938057.1Re-query CCDS DB by Nucleotide ID:NM_198315Re-query CCDS DB by Protein ID:NP_938057Link to BLAST:NP_938057.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_938057.1 415 O00534-3 415 100% 0 0

Chromosomal Locations for CCDS 8445.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 124117512 124117554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124117673 124117875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124118189 124118411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124118533 124118708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124118975 124119089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124122960 124123129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124123366 124123454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124123660 124123804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124124237 124124320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1248 nt):
ATGGTGCACTTCTGTGGCCTACTCACCCTCCACCGGGAGCCAGTGCCGCTGAAGAGTATCTCTGTGAGCG
TGAACATTTACGAGTTTGTGGCTGGTGTGTCTGCAACTTTGAACTACGAGAATGAGGAGAAAGTTCCTTT
GGAGGCCTTCTTTGTGTTCCCCATGGATGAAGACTCTGCTGTTTACAGCTTTGAGGCCTTGGTGGATGGG
AAGAAAATTGTAGCAGAATTACAAGACAAGATGAAGGCCCGCACCAACTATGAGAAAGCCATCTCCCAGG
GCCACCAGGCCTTCTTATTGGAGGGGGACAGCAGCTCCAGGGATGTCTTCTCTTGCAATGTGGGTAACCT
CCAACCTGGGTCGAAGGCGGCAGTCACCCTGAAGTATGTGCAGGAGCTGCCTCTGGAAGCAGATGGGGCT
CTGCGCTTTGTGCTCCCAGCTGTCCTGAATCCTAGATACCAGTTCTCTGGGTCGTCTAAGGACAGTTGCC
TTAATGTGAAGACTCCTATAGTCCCTGTGGAGGACCTGCCCTACACACTCAGCATGGTCGCCACCATAGA
TTCCCAGCATGGCATTGAGAAGGTCCAATCCAACTGCCCCTTGAGTCCTACCGAGTACCTAGGAGAGGAC
AAGACTTCTGCTCAGGTTTCCCTGGCTGCTGGACACAAGTTTGATCGGGACGTGGAACTCCTGATTTACT
ACAATGAGGTGCATACCCCCAGCGTGGTTTTGGAGATGGGGATGCCTAACATGAAGCCAGGTCATTTGAT
GGGAGATCCATCTGCAATGGTGAGTTTCTATCCAAATATCCCAGAAGATCAACCATCAAATACCTGTGGA
GAGTTTATCTTTCTCATGGACCGCTCGGGAAGTATGCAGAGCCCCATGAGTAGCCAGGATACATCTCAGC
TGCGAATACAGGCAGCCAAGGAAACACTGATTTTGCTGCTGAAGAGTTTACCTATAGGCTGTTATTTCAA
CATCTATGGATTTGGCTCTTCCTATGAGGCATGCTTTCCGGAGAGTGTGAAGTACACTCAGCAAACAATG
GAGGAGGCTCTGGGGAGAGTGAAGCTTATGCAGGCCGACCTAGGGGGCACTGAAATCTTGGCACCACTCC
AGAACATTTACAGGGGACCCTCCATCCCAGGCCACCCCCTACAGCTTTTTGTCTTTACAGATGGAGAAGT
TACAGACACGTTTAGTGTAATTAAAGAAGTTAGGATCAACAGACAGAAACACAGGTAG

Translation (415 aa):
MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDG
KKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPGSKAAVTLKYVQELPLEADGA
LRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTLSMVATIDSQHGIEKVQSNCPLSPTEYLGED
KTSAQVSLAAGHKFDRDVELLIYYNEVHTPSVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCG
EFIFLMDRSGSMQSPMSSQDTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTM
EEALGRVKLMQADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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