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Report for CCDS84596.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84596.1 Public Mus musculus 2 Zfp973 23 108 98 CCDS HistoryNCBI Gene:545490Re-query CCDS DB by CCDS ID:84596.1Re-query CCDS DB by GeneID:545490See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84596.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108985.8 ENSMUSP00000104613.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108985.8Link to Ensembl Protein Viewer:ENSMUSP00000104613.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000108985Re-query CCDS DB by Protein ID:ENSMUSP00000104613
Original member Current member NCBI NM_001242943.2 NP_001229872.1 Accepted alive Link to Nucleotide Sequence:NM_001242943.2Link to Protein Sequence:NP_001229872.1Re-query CCDS DB by Nucleotide ID:NM_001242943Re-query CCDS DB by Protein ID:NP_001229872Link to BLAST:NP_001229872.1

Chromosomal Locations for CCDS 84596.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 176670600 176670659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 176678536 176678662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 176678869 176678929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 176680082 176680790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGCGTGACTCTACTGGGTGTTGTGAGAGGAGGTTAGTCAAGCTCAGAACTCCAAACATGGATTTACTCA
CCTATGATGACGTGCATGTGAACTTCACTCAGGAAGAGTGGGCTTTGCTGGATGCTTCTCAGAAGAGTCT
CTACAAAGGTGTGATGGTAGAGACCTATAGGAATCTCACAGCTATAGGTTACAGTTGGGAAGAACATACA
ATTGAAGACCATTTCCAAACTTCTAGAAGTCTTGGAAGGCATGAAAGACGTTCTTCTGCAGAGCAACACT
CTGAGTTTATTCCATGTGGTAAAGCCTTTGCATATCAGAGTCGTAGTCAAAGGCATGTAAGAATACACAA
TGGAGAGAAACACTATGAGTGTAACCAATGTGGTAAAGACTTTGGAACAAGGAGTGTCCTCCAAAGACTT
AAACGAACACATTCAGGAGAGAATCCCTATGAATGTAACCACTGTGGTAAAGCCTTTGCAGAAAGCAGTA
CTCTCCAAATCCATAAGCGAAAACATACAGGAGAGAAACCATATGAATGTAACCACTGTGTTAAAGCCTT
TGCAAAAATGAGTGAACTCCAAATACATAAACGAATACATACAGGAGAGAAACCCTATGAATGTAAGCAA
TGTGGTAAAGCCTTTACACAAAGCAGTCATCTCGGAATCCATAAGCAAACACATACAGGAGAGAAACCCT
ATGAATGTAAACAATGTGGTAAAGCCTTTGCACGAAGCAGTACTCTCCAAACCCATAAGCAAACACATAC
AGGAGAGAAACCCTATGAATGTAAACAATGTGATAAAGCTTTTGTAAGAAGGGGAGAACTCCAAATCCAT
AAGGGAACACATACAGGAGAGAAACCCTATGAATGTAAGCAATGTGGTAAAGCCTTTGCACAAAGCGGTA
CTCTCCAAATCCATAAGCGAACACATACAGGAGAGAAACCCTATTAA

Translation (318 aa):
MRDSTGCCERRLVKLRTPNMDLLTYDDVHVNFTQEEWALLDASQKSLYKGVMVETYRNLTAIGYSWEEHT
IEDHFQTSRSLGRHERRSSAEQHSEFIPCGKAFAYQSRSQRHVRIHNGEKHYECNQCGKDFGTRSVLQRL
KRTHSGENPYECNHCGKAFAESSTLQIHKRKHTGEKPYECNHCVKAFAKMSELQIHKRIHTGEKPYECKQ
CGKAFTQSSHLGIHKQTHTGEKPYECKQCGKAFARSSTLQTHKQTHTGEKPYECKQCDKAFVRRGELQIH
KGTHTGEKPYECKQCGKAFAQSGTLQIHKRTHTGEKPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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