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Report for CCDS84764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84764.1 Public Mus musculus 4 Acot11 23 108 98 CCDS HistoryNCBI Gene:329910Re-query CCDS DB by CCDS ID:84764.1Re-query CCDS DB by GeneID:329910See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84764.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065253.12 ENSMUSP00000069636.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065253.12Link to Ensembl Protein Viewer:ENSMUSP00000069636.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000065253Re-query CCDS DB by Protein ID:ENSMUSP00000069636
Original member Current member NCBI NM_001347159.1 NP_001334088.1 Accepted alive Link to Nucleotide Sequence:NM_001347159.1Link to Protein Sequence:NP_001334088.1Re-query CCDS DB by Nucleotide ID:NM_001347159Re-query CCDS DB by Protein ID:NP_001334088Link to BLAST:NP_001334088.1

Chromosomal Locations for CCDS 84764.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 106748329 106748484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106749262 106749388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106749883 106750014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106752827 106752957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106753714 106753797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106754074 106754140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106755306 106755361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106755845 106755989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106758306 106758425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106760081 106760234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106761964 106762099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106762445 106762543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106763394 106763454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106770704 106770773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106771343 106771556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 106804906 106804998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1845 nt):
ATGCGCGCGCGCCGCTCCTCCCCTTCTGGAAAGGCAGACGTGTCCCTTGCATCTCAGCTCCGTAGGTCGC
CTCCCTGCACTTTCCTAGGACAGGGCTTCGCCTCTATGTTCTCTAATCGCACATCCCGGAAGTCAATCTC
CCATCCGGAGTCTGGAGACCCTCCTACCATGGCAGAGGGTGAAGGATACCGGAACCCCACGGAGGTGCAG
ATGAGCCAGCTGGTACTGCCCTGCCACACCAACCACCGTGGGGAGCTGAGCATTGGACAGTTGCTCAAGT
GGATCGACACCACAGCCTGCCTATCAGCGGAGAGGCATGCTGGCTGTCCCTGCGTCACAGCCTCTATGGA
TGACATCTACTTCGACCATACCATTAGTGTCGGCCAAGTGGTGAATATCAAGGCCAAGGTGAACCGGGCC
TTCAACTCCAGCATGGAGGTGGGAATCCAGGTGGTCTCTGAGGATCTGTGCTCTGAGAAGCAGTGGAGTG
TCTGCAAGGCCTTGGCCACCTTTGTGGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGCAGGTCATCCC
ATTGACCGAGGAGGAGAAGACTGAACATGGGGTGGCGGCTGAGCGCCGGCGTATGCGACTGGTCTATGCA
GACACCATCAAAGATCTCCTAACCCACTGTGTCATCCAGGACGATTTGGACAAGGACTGCAGCAATATGG
TGCCAGCCGAGAAGACCCGAGTGGAGAGTGTGGAGCTGGTGCTGCCTCCTCACGCCAATCATCAGGGCAA
TACCTTCGGGGGACAGATCATGGCTTGGATGGAGAATGTGGCCACCATTGCAGCCAGCCGGCTCTGTCAC
GCCCACCCTACGCTCAAGGCCATCGAGATGTTCCATTTCCGAGGCCCGTCTCAGGTGGGGGACCGTCTGG
TGCTCAAGGCCATCGTGAATAACGCCTTTAAGCACAGCATGGAGGTGGGTGTGTGTGTGGAGGCGTACCG
CCAGGAAGCTGAGACCCAGCGCCGGCACATCAACAGCGCCTTCATGACCTTCGTGGTCCTGGACAAAGAT
GACCAGCCTCAGAAGCTGCCCTGGATTCGTCCCCAGCCTGGAGAGGGTGAACGGCGATACCGAGAAGCCA
GTGCCAGGAAGAAGATCCGCCTGGACAGGAAATACCTTGTGTCCTGTAAGCAGGCAGAAGTGGCCCTGTC
TGTCCCCTGGGACCCTAGCAACCAGGTATACCTGAGCTACTACAACGTGTCCTCTCTGAAGACGCTCATG
GCCAAGGACAACTGGGTGCTGTCCGTGGAGATCAGCGAGGTCCGCCTGTACATCCTAGAAGAGGACTTCC
TCTCCTTTCACTTGGAGATGGTGGTAAATGTGGATGCCGCCCAGGTCTTTCAGCTGCTGTCAGACCTGCG
CAGGAGACCAGAGTGGGACAAGCATTACCGGAGTGTGGAGCTGGTGCAGCAAGTGGATGAGGATGACGCC
ATCTACCACGTCATCAGCCCCGCCCTGAGCGGGAACACCAAGCCCCAGGACTTTGTGATCCTGGCCTCTA
GGCGGAAGCCTTGTGACAATGGGGACCCCTATGTCATTGCCCTGAGGTCGGTCACGCTGCCCACGCACCA
TGAGACACCGGAATACCAACGTGGGGAGACTCTCTGTTCAGGCTTCTGTCTGTGGCGTGAGGGGGACCAG
ATGACTAAGGTTTCTTACTACAACCAGGCCACCCCCGGCTTTCTCAACTATGTGACCACCAATGTGTCCG
GCCTGTCCTCAGAATTCTACAACACTTTCAAGGCTTGTGAGAGTTTTCTGTTGGACAACCGGAATGACCT
AGCTCCCAGCCTCCAGACCCTCTAG

Translation (614 aa):
MRARRSSPSGKADVSLASQLRRSPPCTFLGQGFASMFSNRTSRKSISHPESGDPPTMAEGEGYRNPTEVQ
MSQLVLPCHTNHRGELSIGQLLKWIDTTACLSAERHAGCPCVTASMDDIYFDHTISVGQVVNIKAKVNRA
FNSSMEVGIQVVSEDLCSEKQWSVCKALATFVAHRELSKVKLKQVIPLTEEEKTEHGVAAERRRMRLVYA
DTIKDLLTHCVIQDDLDKDCSNMVPAEKTRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCH
AHPTLKAIEMFHFRGPSQVGDRLVLKAIVNNAFKHSMEVGVCVEAYRQEAETQRRHINSAFMTFVVLDKD
DQPQKLPWIRPQPGEGERRYREASARKKIRLDRKYLVSCKQAEVALSVPWDPSNQVYLSYYNVSSLKTLM
AKDNWVLSVEISEVRLYILEEDFLSFHLEMVVNVDAAQVFQLLSDLRRRPEWDKHYRSVELVQQVDEDDA
IYHVISPALSGNTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHHETPEYQRGETLCSGFCLWREGDQ
MTKVSYYNQATPGFLNYVTTNVSGLSSEFYNTFKACESFLLDNRNDLAPSLQTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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