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Report for CCDS85432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85432.1 Public Mus musculus 7 Tacc2 23 108 98 CCDS HistoryNCBI Gene:57752Re-query CCDS DB by CCDS ID:85432.1Re-query CCDS DB by GeneID:57752See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85432.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000207282.1 ENSMUSP00000146848.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207282.1Link to Ensembl Protein Viewer:ENSMUSP00000146848.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000207282Re-query CCDS DB by Protein ID:ENSMUSP00000146848
Original member Current member NCBI NM_001347637.2 NP_001334566.1 Accepted alive Link to Nucleotide Sequence:NM_001347637.2Link to Protein Sequence:NP_001334566.1Re-query CCDS DB by Nucleotide ID:NM_001347637Re-query CCDS DB by Protein ID:NP_001334566Link to BLAST:NP_001334566.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334566.1 947 Q9JJG0-3 947 100% 0 0

Chromosomal Locations for CCDS 85432.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 130692920 130692987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130716703 130716839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130728523 130729828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130733506 130733566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130734949 130735150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130739812 130739873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130740840 130740955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130742130 130742301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130751190 130751333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130751834 130751910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130753618 130753661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130759165 130759325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130759534 130759640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130759915 130760035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130764254 130764319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2844 nt):
ATGGGAGGGTCGCAGTCCCTGCAGCCAGCCCCAGCCAGTGACCTGAACCTGGAGGTTTCTGAGGCCATGA
GTTCCGACTCTGAGGAAGCCTTTGAGACCCCCGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCCCTCC
CCCTCCACCCCCTGAAGTCACCCCAGAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCAGGATGC
ATTTCTGAGCCACCGGTTGTGGTTCCCGATGGCCCTCGCAGCAGCGAGTCCGTGGAAGGAAGCCCTTTCC
GTCCTTCCCACTCCTCCTCGGCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACAACTT
AGACTTCGACAGCATCGAGCTGGTGGATAACTTCCAGAGCTTGGAGCCGTGCTCTGCCGACTCTAAGGGT
CAGGAGTGTAAGGTGAGCACGCGGAGGAAATCCACCGAGTCCGTGCCACCCTCCAAGTCCACGCTGTCCC
GTTCGCTTAGCCTACAAGCCAGTGACTTTGACGGTGCTTCTTGCCCCGGCAGCCCTGAAGCTGGGACCCT
TACCACAGATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCACCCTTAAGCGAACTAAAAAAACACGG
CCACCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACCCACAGAAACCCCCCCAGTGAAGGAGACCCAAC
AGGAACCAGGTGAAGAGAGTCCAGTCCCCAGTGAGGAACACTTAGCACCAGAGACAAAGACGGAGTCGGC
CACACCTGAGGGCGCTGGTTGCACCTTGTCAGACGATACACCCCTGGAGTCCCCTGCTGTCCCCACAGCC
ACCTGTCCTCTGACTTTGGAGAGTGCAGAAGACGTTAGCCCCCTGGTTTCTGGAGGTGGCAGAGTGCAGA
ACTCACCCCCAGTTGGGAGGAAATCAGTGCCTCTTACCACAGCCTCTGAGGCGGTGGAGGTGACCCTGTC
GGACAGTGGGGGGCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGAGGCTGGAGTTTGACTATTCTGAG
GACAAGGGAAGTTGGGAGAGTCAGCAGGAAAACGCCCCTCCCACCAAAAAGATAGGCAAGAAGCCAGTTG
CCAAAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCCCCGAGAAACTTGACAACACTCCTGCCTCACC
TCCAAGGTCCCCTACTGAACCCAGTGACACCCCTATTGCTAAAGGTACCTACACCTTTGATATAGACAAG
TGGGATGACCCCAATTTTAACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACTGTCCCAAC
AATCGTACAACTTTGACCCTGACGCCTGTGAAGAGTCCCTTGACCCCTTTAAGGCATCCTCTAAGACCCC
CAGCTCACCTTCTAAGTCCCCAGCCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGGATGGG
TTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACTGACACGTTTAGGGTGAAGAAGTCTCCAA
AGCGGTCTCCTCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCTCAGC
CATCTCTACAGTGGTCCACGCCACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTATG
ACGGTGGACTTGGATGCTGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTCTAACTTTGTAAATGAGA
CCAAATTCAATTCACCCTCAGAGGAGCTGGACTACAGAAACTCCTATGAAATTGAATACATGGAAAAGCT
TGGCTCCTCCTTACCTCAGGACGATGACACTCCGAAGAAGCAGGCCTTGTACCTTATGTTTGACACTCCT
CAGGAGAGCCCCGTCAAGTCTCCTCCAGTCCGGATGTCAGATTCCCCAACTCCATGTTCAGGGTCGAGTT
TTGAGGACACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTGCCCTC
CAGTCAGGAGCCTCTCTTGCAGGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGCCATGGCCTTGGGC
ACCCCAGCAGAAGCAATTGAAATCAGGGAAGCTGCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCT
TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAGCAGCCAGACCTGGA
CTCTGCACTCCAGGTTGCCAGAGCAGAGGTCATCGCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAA
TATGAAGAAAGCCGACGGGAAGTGGTGGAAATGAGGAAAATTGTGGCCGAATATGAGAAGACCATTGCAC
AGATGATCGAGGACGAACAGAGAGAAAAATCCATCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA
GGAGCAAGCCCTGGCTGACCTGAACTCTGTGGAAAAGTCTCTGGCTGACCTCTTCAGGAGATACGAAAAG
ATGAAGGAGGTCCTGGAAGGTTTTCGAAAGAATGAAGAGGTGTTGAAGAAATGTGCGCAGGAGTACCTAT
CCCGAGTGAAGAAAGAGGAACAGAGGTACCAGGCCCTGAAGGTGCACGCCGAAGAGAAACTGGACAGAGC
CAATGCAGAGATTGCCCAGGTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGG
AAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCAGAAGAATAAAGAGATAGAAGAACTCA
CCAAGATTTGTGACGAGCTGATCGCCAAGATGGGAAAAAGCTAA

Translation (947 aa):
MGGSQSLQPAPASDLNLEVSEAMSSDSEEAFETPESTTPVKAPPAPPPPPPEVTPEPEVIDPPAPEEPGC
ISEPPVVVPDGPRSSESVEGSPFRPSHSSSAVFDEDKPIASSGTYNLDFDSIELVDNFQSLEPCSADSKG
QECKVSTRRKSTESVPPSKSTLSRSLSLQASDFDGASCPGSPEAGTLTTDACGTGSNSASSTLKRTKKTR
PPSLKKKQATKKPTETPPVKETQQEPGEESPVPSEEHLAPETKTESATPEGAGCTLSDDTPLESPAVPTA
TCPLTLESAEDVSPLVSGGGRVQNSPPVGRKSVPLTTASEAVEVTLSDSGGQEDLPAKGLSVRLEFDYSE
DKGSWESQQENAPPTKKIGKKPVAKMPLRRPKMKKTPEKLDNTPASPPRSPTEPSDTPIAKGTYTFDIDK
WDDPNFNPFSSTSKMQESPKLSQQSYNFDPDACEESLDPFKASSKTPSSPSKSPASFEIPASTTEADGDG
LNKPAKKKKTPLKTDTFRVKKSPKRSPLSDPPSQDPTPAATPEAPSAISTVVHATDEEKLAVTSQKWTCM
TVDLDADKQDFPQPSDLSNFVNETKFNSPSEELDYRNSYEIEYMEKLGSSLPQDDDTPKKQALYLMFDTP
QESPVKSPPVRMSDSPTPCSGSSFEDTEALVNAATKLQHPVARGLPSSQEPLLQVPEKPSQKELEAMALG
TPAEAIEIREAAHPPDVSISKTALYSRIGSTEVEKPPGLLFQQPDLDSALQVARAEVIAKEREVSEWRDK
YEESRREVVEMRKIVAEYEKTIAQMIEDEQREKSISHQTVQQLVLEKEQALADLNSVEKSLADLFRRYEK
MKEVLEGFRKNEEVLKKCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEIAQVRGKAQQEQAAYQASLR
KEQLRVDALERTLEQKNKEIEELTKICDELIAKMGKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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