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Report for CCDS8559.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
8559.1 |
Public |
Homo sapiens |
12 |
MLF2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:8079](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:8559.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:8079](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 12 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 8559.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000203630.10 |
ENSP00000203630.5 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000203630.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000203630.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000203630](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000203630](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000435120.5 |
ENSP00000403941.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000435120.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000403941.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000435120](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000403941](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000539187.5 |
ENSP00000446317.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000539187.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000446317.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000539187](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000446317](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001382225.1 |
NP_001369154.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001382225.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001369154.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001382225](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001369154](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001369154.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001382226.1 |
NP_001369155.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001382226.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001369155.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001382226](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001369155](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001369155.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_005439.3 |
NP_005430.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_005439.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_005430.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_005439](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_005430](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_005430.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 8559.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (747 nt): ATGTTCCGCTTCATGAGGGACGTGGAGCCTGAGGATCCCATGTTCCTGATGGATCCCTTTGCTATTCACC GTCAGCATATGAGCCGTATGTTGTCAGGTGGCTTTGGATATAGCCCCTTCCTCAGCATCACAGATGGCAA CATGCCAGGGACCAGGCCTGCCAGCCGCCGGATGCAGCAGGCTGGAGCTGTCTCCCCCTTTGGGATGCTG GGAATGTCGGGTGGTTTCATGGACATGTTTGGGATGATGAATGACATGATTGGAAACATGGAACACATGA CAGCTGGAGGCAATTGCCAGACCTTCTCATCTTCCACTGTCATCTCCTACTCCAATACGGGTGATGGTGC CCCCAAGGTCTACCAAGAGACATCAGAGATGCGCTCGGCACCAGGCGGGATCCGGGAGACACGGAGGACT GTTCGGGATTCAGACAGTGGACTGGAGCAGATGTCCATTGGGCATCACATCCGGGACAGGGCTCACATCC TCCAGCGCTCCCGAAACCATCGCACGGGGGACCAGGAGGAGCGGCAGGACTATATCAACCTGGATGAGAG TGAGGCCGCAGCGTTTGATGACGAGTGGCGGCGGGAGACCTCCCGATTCCGGCAGCAGCGTCCCCTGGAG TTTCGGCGGCTTGAGTCCTCAGGGGCTGGGGGACGAAGGGCGGAGGGGCCTCCCCGCCTGGCCATCCAGG GACCTGAGGACTCCCCTTCCCGACAGTCCCGCCGCTATGACTGGTGA
Translation (248 aa): MFRFMRDVEPEDPMFLMDPFAIHRQHMSRMLSGGFGYSPFLSITDGNMPGTRPASRRMQQAGAVSPFGML GMSGGFMDMFGMMNDMIGNMEHMTAGGNCQTFSSSTVISYSNTGDGAPKVYQETSEMRSAPGGIRETRRT VRDSDSGLEQMSIGHHIRDRAHILQRSRNHRTGDQEERQDYINLDESEAAAFDDEWRRETSRFRQQRPLE FRRLESSGAGGRRAEGPPRLAIQGPEDSPSRQSRRYDW
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