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Report for CCDS85931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85931.1 Public Homo sapiens 1 HSPB7 24 110 108 CCDS HistoryNCBI Gene:27129Re-query CCDS DB by CCDS ID:85931.1Re-query CCDS DB by GeneID:27129See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85931.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000406363.2 ENSP00000385472.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406363.2Link to Ensembl Protein Viewer:ENSP00000385472.2Re-query CCDS DB by Nucleotide ID:ENST00000406363Re-query CCDS DB by Protein ID:ENSP00000385472
Original member Current member NCBI NM_001349683.2 NP_001336612.1 Accepted alive Link to Nucleotide Sequence:NM_001349683.2Link to Protein Sequence:NP_001336612.1Re-query CCDS DB by Nucleotide ID:NM_001349683Re-query CCDS DB by Protein ID:NP_001336612Link to BLAST:NP_001336612.1

Chromosomal Locations for CCDS 85931.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 16015580 16015759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16017074 16017219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16017765 16017963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGAGCCACAGAACCTCTTCCACCTTCCGAGCGGAGAGAAGTTTCCATTCCTCTTCCTCTTCCTCCTCCT
CTTCCACCTCCTCCTCGGCCTCCCGTGCTCTCCCGGCCCAGGACCCGCCCATGGAGAAGGCCCTGAGCAT
GTTTTCCGATGACTTTGGCAGCTTCATGCGGCCCCACTCGGAGCCCCTGGCCTTCCCAGCCCATCCCACA
GCCCGCCCCGGTGGGGCAGGCAACATCAAGACCCTAGGAGACGCCTATGAGTTTGCGGTGGACGTGAGAG
ACTTCTCACCTGAAGACATCATTGTCACCACCTCCAACAACCACATCGAGGTGCGGGCTGAGAAGCTGGC
GGCTGACGGCACTGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCCGGAGGACGTGGACCCGACGTCG
GTGACCTCGGCTCTGCGGGAGGACGGCAGCCTCACTATCCGGGCACGGCGTCACCCGCATACAGAACACG
TCCAGCAGACCTTCCGGACGGAGATCAAAATCTGA

Translation (174 aa):
MSHRTSSTFRAERSFHSSSSSSSSSTSSSASRALPAQDPPMEKALSMFSDDFGSFMRPHSEPLAFPAHPT
ARPGGAGNIKTLGDAYEFAVDVRDFSPEDIIVTTSNNHIEVRAEKLAADGTVMNTFAHKCQLPEDVDPTS
VTSALREDGSLTIRARRHPHTEHVQQTFRTEIKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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