CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS86182.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
86182.1 |
Public |
Homo sapiens |
11 |
PLEKHA7 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:144100](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:86182.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:144100](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 11 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 86182.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000531066.6 |
ENSP00000435389.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000531066.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000435389.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000531066](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000435389](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001329630.2 |
NP_001316559.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001329630.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001316559.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001329630](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001316559](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001316559.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 86182.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3816 nt): ATGGCGGCGGCGACGGTCGGGCGGGACACTTTACCTGAGCATTGGTCCTACGGGGTGTGCCGGGATGGCC GCGTCTTCTTCATCAATGACCAGCTCCGCTGCACGACCTGGCTGCATCCGCGCACCGGGGAGCCCGTCAA CTCGGGCCACATGATCCGCTCAGACCTGCCCCGCGGCTGGGAGGAGGGCTTCACGGAGGAGGGCGCCAGC TACTTCATCGACCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAA ATAGTGAATTCATTCTTCAAGAAGAGCCGAATCCACATATGTCGAAGCAAGACAGAAACCAAAGACCGTC CAGCATGGTCAGTGAAACATCCACGGCTGGGACCGCCTCCACCCTGGAGGCCAAGCCTGGACCCAAGATC ATAAAGTCCAGCAGTAAAGTCCACAGCTTTGGGAAGAGAGACCAGGCCATTCGGAGGAACCCCAATGTTC CCGTGGTGGTGAGGGGCTGGCTGCACAAGCAGGACAGTTCTGGGATGAGGCTGTGGAAAAGGAGGTGGTT TGTGCTTGCTGATTACTGCTTATTTTACTATAAAGACAGCCGAGAAGAAGCGGTCCTCGGGAGCATCCCC TTGCCCAGCTACGTGATCTCTCCTGTGGCCCCTGAGGATCGCATAAGCCGCAAATATTCCTTTAAGGCTG TGCACACGGGGATGCGAGCGCTCATCTATAACAGCTCCACAGCGGGCTCTCAGGCCGAGCAGTCAGGCAT GAGGACCTACTACTTCAGTGCCGACACCCAGGAGGACATGAACGCTTGGGTCAGGGCCATGAACCAGGCT GCACAGGTGCTGTCTCGATCGTCACTGAAGAGGGATATGGAGAAGGTGGAGCGGCAGGCTGTCCCCCAGG CCAACCACACAGAGTCCTGTCACGAATGTGGCCGGGTGGGACCCGGACATACGAGAGATTGTCCTCATCG TGGCCATGATGACATTGTCAACTTCGAGAGGCAGGAGCAGGAGGGAGAGCAGTACCGTTCCCAGAGGGAC CCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGCCAGCCGAGGAGGATGCCTTGT TTATGGATTTACCCACTGGCCCAAGAGGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAATGGAATGCT GCCTGCCTCATATGGCCCAGGAGAACAGAATGGGACTGGTGGGTACCAGCGGGCCTTTCCTCCCAGGACC AACCCTGAAAAACACAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCAGAAAG GGGATAGCAGGAGTCTTCCCTTGGACCAGACGCTTCCTCGCCAGGGTCCTGGCCAATCCCTGTCCTTCCC AGAAAACTACCAGACTCTTCCCAAGAGCACCCGACACCCCTCGGGGGGCTCCTCGCCACCTCCCCGAAAC CTGCCAAGTGACTACAAGTATGCGCAGGACCGAGCCAGCCACCTGAAGATGTCGAGTGAAGAGCGCCGGG CGCACCGGGATGGCACCGTGTGGCAGCTCTACGAGTGGCAGCAGCGCCAGCAGTTCCGGCACGGCAGCCC CACAGCGCCCATCTGCCTTGGCTCCCCAGAGTTCACCGACCAGGGCCGGAGCAGGAGCATGCTAGAGGTG CCCCGCTCCATCTCTGTGCCTCCATCTCCCTCGGACATCCCTCCCCCAGGACCCCCAAGGGTCTTCCCAC CCCGGCGGCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGACAT CTCGCTGGGGGATTCTCCAAGGAGGGCACGGGGCCACGCTGTCAAGAACTCATCTCATGTGGACCGACGC TCCATGCCCTCCATGGGTTACATGACCCACACCGTCAGCGCTCCCAGTTTACATGGAAAATCGGCTGATG ATACCTACCTCCAGCTGAAGAAAGACCTGGAGTACCTGGATCTAAAGATGACAGGCCGGGACCTTCTCAA GGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAGCGACACTGACGTCAAACTGAGCATCTTCTGTGAA CAAGACAGGGTCCTCCAGGACTTGGAAGACAAGATACGAGCCCTTAAAGAGAACAAAGACCAGCTAGAAT CTGTGCTGGAGGTGTTGCACAGACAGATGGAGCAGTACCGAGACCAGCCCCAGCACTTGGAGAAGATTGC CTACCAGCAGAAGTTGCTGCAGGAGGACCTTGTCCATATCCGAGCTGAGCTCTCCAGAGAGTCCACTGAG ATGGAAAATGCTTGGAACGAATACCTGAAGTTGGAGAATGATGTGGAACAGCTGAAGCAGACCCTGCAGG AGCAACACAGAAGAGCCTTTTTTTTCCAGGAGAAATCGCAGATACAGAAAGATCTATGGAGAATTGAAGA TGTCACTGCAGGCCTGAGTGCAAATAAAGAGAACTTCAGAATTCTAGTGGAGTCAGTAAAAAATCCGGAG AGAAAAACGGTGCCTTTGTTTCCTCACCCGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAAGCCGCCCC CACAGCCCAGTCCTCCCACCAGCCCTGTGCGGACCCCTCTGGAGGTTCGACTCTTCCCCCAGCTGCAAAC CTACGTGCCGTACCGACCTCACCCACCCCAGCTGAGGAAAGTGACATCCCCCCTTCAGTCACCAACTAAG GCGAAGCCCAAAGTTGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCGAACTCTACAGCCCAGAGGACC AGCCCCCGGCTGTGCCGCCTCTGCCAAGAGAGGCCACCATCATCCGGCACACATCTGTGCGGGGCCTCAA GCGGCAGTCAGACGAGAGGAAGCGAGACCGGGAGCTGGGGCAGTGTGTGAATGGGGATTCCAGGGTGGAG CTGCGGTCGTATGTCAGTGAGCCTGAGCTGGCGACCCTCAGCGGGGACATGGCCCAGCCCTCCCTAGGAC TTGTGGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAGAGGGCTCTCAGGGTCCACGTCAAGGCTCCA GCAGTCGTCCACCATTGCTCCCTACGTCACACTCCGGAGGGGTCTCAATGCCGAAAGCAGCAAGGCGACC TTCCCTAGACCTAAGAGTGCCTTGGAGCGCCTGTACTCAGGGGATCACCAGCGAGGCAAGATGAGTGCAG AGGAGCAGCTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCA AGGGGAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTGGAGATCTTGGCTCATGG AAGCGTGAGCAGGACTTTGACCTGCAGTTGCTGGAACGGGTCGTGCAAGGGGAAAAAAAGGACAAGGAGG AGAATGGCTGGTTGAAAGTGCAGGCCATGCCTGTCACTGAGTTGGACCTGGAGCCTCAAGACTATGACTT GGACATCAGCAGAGAGCTGTCCAAACCAGAGAAGGTGTCAATCCCTGAGCGCTACGTGGAGCTAGATCCC GAAGAGCCACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCGCAACATCCTCG CCCGGTCAAGCATGTGCAACCTACAGCCGACCTCAGGCCAGGACCAGAACAGTGTGGCTGACCTGGACTT GCAGCTGCAGGAGCAGGAGCGCATCATCAACATCTCCTACGCCCTGGCCTCCGAGGCCTCCCAGCGTAGC AAGCAGGTGGCAGCCCAGGCAGTGACTGACCCGTGA
Translation (1271 aa): MAAATVGRDTLPEHWSYGVCRDGRVFFINDQLRCTTWLHPRTGEPVNSGHMIRSDLPRGWEEGFTEEGAS YFIDHNQQTTAFRHPVTGQFSPENSEFILQEEPNPHMSKQDRNQRPSSMVSETSTAGTASTLEAKPGPKI IKSSSKVHSFGKRDQAIRRNPNVPVVVRGWLHKQDSSGMRLWKRRWFVLADYCLFYYKDSREEAVLGSIP LPSYVISPVAPEDRISRKYSFKAVHTGMRALIYNSSTAGSQAEQSGMRTYYFSADTQEDMNAWVRAMNQA AQVLSRSSLKRDMEKVERQAVPQANHTESCHECGRVGPGHTRDCPHRGHDDIVNFERQEQEGEQYRSQRD PLEGKRDRSKARSPYSPAEEDALFMDLPTGPRGQQAQPQRAEKNGMLPASYGPGEQNGTGGYQRAFPPRT NPEKHSQRKSNLAQVEHWARAQKGDSRSLPLDQTLPRQGPGQSLSFPENYQTLPKSTRHPSGGSSPPPRN LPSDYKYAQDRASHLKMSSEERRAHRDGTVWQLYEWQQRQQFRHGSPTAPICLGSPEFTDQGRSRSMLEV PRSISVPPSPSDIPPPGPPRVFPPRRPHTPAERVTVKPPDQRRSVDISLGDSPRRARGHAVKNSSHVDRR SMPSMGYMTHTVSAPSLHGKSADDTYLQLKKDLEYLDLKMTGRDLLKDRSLKPVKIAESDTDVKLSIFCE QDRVLQDLEDKIRALKENKDQLESVLEVLHRQMEQYRDQPQHLEKIAYQQKLLQEDLVHIRAELSRESTE MENAWNEYLKLENDVEQLKQTLQEQHRRAFFFQEKSQIQKDLWRIEDVTAGLSANKENFRILVESVKNPE RKTVPLFPHPPVPSLSTSESKPPPQPSPPTSPVRTPLEVRLFPQLQTYVPYRPHPPQLRKVTSPLQSPTK AKPKVEDEAPPRPPLPELYSPEDQPPAVPPLPREATIIRHTSVRGLKRQSDERKRDRELGQCVNGDSRVE LRSYVSEPELATLSGDMAQPSLGLVGPESRYQTLPGRGLSGSTSRLQQSSTIAPYVTLRRGLNAESSKAT FPRPKSALERLYSGDHQRGKMSAEEQLERMKRHQKALVRERKRTLGQGERTGLPSSRYLSRPLPGDLGSW KREQDFDLQLLERVVQGEKKDKEENGWLKVQAMPVTELDLEPQDYDLDISRELSKPEKVSIPERYVELDP EEPPSLEELQARYRKAEKIRNILARSSMCNLQPTSGQDQNSVADLDLQLQEQERIINISYALASEASQRS KQVAAQAVTDP
|