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Report for CCDS86768.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86768.1 Public Homo sapiens 19 RPS16 24 110 108 CCDS HistoryNCBI Gene:6217Re-query CCDS DB by CCDS ID:86768.1Re-query CCDS DB by GeneID:6217See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86768.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339471.8 ENSP00000367806.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339471.8Link to Ensembl Protein Viewer:ENSP00000367806.2Re-query CCDS DB by Nucleotide ID:ENST00000339471Re-query CCDS DB by Protein ID:ENSP00000367806
Original member Current member NCBI NM_001363860.2 NP_001350789.1 Accepted alive Link to Nucleotide Sequence:NM_001363860.2Link to Protein Sequence:NP_001350789.1Re-query CCDS DB by Nucleotide ID:NM_001363860Re-query CCDS DB by Protein ID:NP_001350789Link to BLAST:NP_001350789.1

Chromosomal Locations for CCDS 86768.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39433350 39433418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39433522 39433761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39435607 39435708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39435848 39435895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGCCGTCCAAGGGCCCGCTGCAGTCTGTGCAGGTCTTCGGACGCAAGAAGACAGCGACAGCTGTGGCGC
ACTGCAAACGCGGCAATGGTCTCATCAAGGTGAACGGGCGGCCCCTGGAGATGATTGAGCCGCGCACGCT
ACAGTACAAGCTGCTGGAGCCAGTTCTGCTTCTCGGCAAGGAGCGATTTGCTGGTGTAGACATCCGTGTC
CGTGTAAAGGGTGGTGGTCACGTGGCCCAGATTTATGGTGAGTCCCAGGAACTGGGCGCATGGAGGAGGT
GGCTCTGGGAGGGAGGCCTTCACAGCGCTCCTGTACCCTTTAATTGTGTGTCTTTCTCACAGCTATCCGT
CAGTCCATCTCCAAAGCCCTGGTGGCCTATTACCAGAAATATGTGGATGAGGCTTCCAAGAAGGAGATCA
AAGACATCCTCATCCAGTATGACCGGACCCTGCTGGTAG

Translation (152 aa):
MPSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRV
RVKGGGHVAQIYGESQELGAWRRWLWEGGLHSAPVPFNCVSFSQLSVSPSPKPWWPITRNMWMRLPRRRS
KTSSSSMTGPCW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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