CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS86888.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
86888.1 |
Public |
Homo sapiens |
2 |
SLC4A10 |
24 |
110 |
108 |
|
Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 86888.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000272716.9 |
ENSP00000272716.5 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_001354446.2 |
NP_001341375.1 |
|
Accepted |
alive |
|
Chromosomal Locations for CCDS 86888.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3321 nt): ATGGAGATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCTGCCTACGAGAAATGATGAAGAAGCAGTTG TGGATAGAGGTGGAACTCGTTCTATTCTCAAAACACACTTTGAGAAAGAAGATTTAGAAGGTCATCGAAC ACTATTTATTGGAGTACATGTGCCCTTGGGAGGAAGAAAAAGCCATCGACGTCACAGGCATCGTGGTCAT AAACACAGAAAGAGAGACAGAGAAAGAGATTCAGGATTAGAGGATGGAAGGGAGTCACCTTCTTTTGACA CCCCATCACAGAGGGTACAGTTTATTCTTGGAACCGAGGATGATGACGAGGAACACATTCCTCATGACCT TTTCACAGAACTGGATGAGATTTGTTGGCGTGAAGGTGAGGACGCTGAGTGGCGAGAAACAGCCAGGTGG TTGAAGTTTGAAGAAGATGTGGAAGATGGAGGAGAAAGGTGGAGCAAGCCTTATGTGGCTACTCTTTCAT TGCACAGCTTGTTTGAATTGAGAAGTTGTATTCTGAATGGAACTGTGTTGCTGGACATGCATGCCAACAC TTTAGAAGAAATTGCAGATATGGTTCTTGACCAACAAGTGAGCTCAGGTCAGCTGAATGAAGATGTACGC CATAGGGTCCATGAGGCATTGATGAAACAGCATCATCATCAGAATCAGAAAAAACTCACCAACAGGATTC CCATTGTTCGTTCCTTTGCTGATATTGGCAAGAAACAGTCAGAACCAAATTCCATGGACAAAAATGCAGG TCAGGTTGTTTCTCCTCAGTCTGCTCCAGCCTGTGTTGAAAATAAAAATGATGTTAGCAGAGAAAACAGC ACTGTTGACTTTAGCAAGGTTGATCTGCATTTTATGAAAAAGATTCCTCCAGGTGCTGAAGCATCGAACA TCTTAGTGGGAGAACTGGAGTTCTTGGATCGAACAGTAGTTGCGTTTGTCAGGTTGTCTCCAGCTGTATT GCTTCAAGGACTGGCTGAAGTCCCAATCCCAACCAGATTTTTGTTCATTCTTCTGGGACCCCTGGGAAAG GGTCAACAGTACCATGAGATTGGCAGATCAATTGCAACCCTAATGACAGATGAGGTATTTCATGATGTTG CCTATAAAGCTAAAGATCGTAATGACTTGGTATCAGGAATTGATGAGTTTCTGGATCAGGTTACTGTTCT CCCTCCTGGAGAATGGGATCCAAGCATTCGAATAGAGCCTCCCAAAAATGTTCCTTCCCAGGAGAAGAGG AAGATTCCTGCTGTACCAAATGGAACAGCAGCTCATGGGGAAGCAGAGCCCCACGGAGGACATAGTGGAC CTGAACTCCAGCGAACTGGAAGGATTTTTGGGGGACTTATTTTAGATATCAAAAGAAAAGCTCCATACTT CTGGAGTGACTTCAGAGATGCTTTCAGCCTGCAGTGCTTAGCATCTTTTCTATTTCTCTACTGCGCGTGT ATGTCTCCTGTCATCACGTTTGGAGGACTGCTGGGAGAAGCAACTGAAGGGCGTATAAGTGCAATTGAAT CTCTCTTTGGAGCATCCATGACCGGGATAGCCTATTCTCTCTTTGGTGGACAGCCTCTTACCATATTAGG CAGTACAGGACCAGTTTTGGTGTTTGAAAAGATTTTGTTTAAATTTTGCAAAGAATATGGGCTGTCATAC CTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAACTCTATGTATCATACTTGTGGCCACAGATGCTA GTTCCCTTGTCTGCTACATCACTCGGTTTACTGAAGAAGCTTTTGCTTCCCTGATTTGCATCATTTTCAT TTATGAGGCCCTGGAGAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGAA CTGCTGACACAATACTCGTGTAACTGTGTGGAACCGCATAATCCCAGCAATGGCACATTGAAGGAATGGA GGGAATCCAATATTTCTGCCTCTGACATAATTTGGGAGAACCTAACTGTGTCAGAATGCAAATCATTGCA TGGAGAGTATGTTGGACGGGCCTGTGGCCATGATCACCCATATGTTCCAGATGTTCTATTTTGGTCTGTG ATCCTGTTCTTTTCCACAGTTACTCTGTCAGCCACCCTGAAGCAGTTCAAGACTAGCAGATATTTTCCAA CCAAGGTTCGATCCATAGTGAGTGACTTTGCTGTCTTTCTTACAATTCTGTGTATGGTTTTAATTGACTA TGCCATTGGGATCCCATCTCCAAAACTACAAGTACCAAGTGTTTTCAAGCCCACTAGAGATGATCGTGGC TGGTTTGTTACGCCTTTAGGTCCAAACCCATGGTGGACAGTAATAGCTGCTATAATTCCAGCTCTGCTTT GTACTATTCTAATTTTTATGGACCAACAGATTACAGCTGTCATCATCAACAGGAAAGAGCATAAGCTAAA GAAAGGTTGTGGGTACCATCTGGACCTATTAATGGTGGCTGTCATGCTCGGTGTATGCTCCATCATGGGC CTGCCATGGTTTGTGGCTGCCACAGTCCTCTCCATCACTCATGTCAATAGCCTAAAACTGGAATCAGAAT GCTCAGCTCCAGGAGAACAACCCAAATTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCTTATGATTTT TATTCTTATGGGTTCATCAGTCTTTATGACCAGTATTCTGAAGTTTATTCCCATGCCAGTGCTATATGGA GTGTTTCTTTATATGGGTGCTTCATCTCTAAAGGGAATTCAGTTCTTTGATAGGATAAAGCTCTTCTGGA TGCCGGCAAAACATCAACCAGATTTTATATACCTAAGGCACGTACCGCTTCGAAAAGTGCATCTCTTCAC AATTATTCAGATGAGTTGCCTTGGCCTTTTGTGGATAATAAAAGTTTCAAGAGCTGCTATTGTCTTTCCC ATGATGGTGTTAGCCCTGGTATTTGTAAGAAAGTTGATGGACTTGTTGTTCACGAAGCGGGAACTCAGCT GGTTGGATGATTTGATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAAAG TATGCTAGCTATGGAAGATGAGGGCACAGTACAACTCCCATTGGAAGGGCACTATAGAGATGATCCATCT GTGATCAATATATCTGATGAAATGTCAAAGACTGCCTTGTGGAGGAACCTTCTGATTACTGCCGATAACT CAAAAGATAAGGAGTCAAGCTTTCCTTCCAAAAGCATTGAAAGCCGAAAAGAGAAGAAAGCTGACTCAGG GAAAGGTGTTGACAGGGAGACTTGTCTATGA
Translation (1106 aa): MEIKDQGAQMEPLLPTRNDEEAVVDRGGTRSILKTHFEKEDLEGHRTLFIGVHVPLGGRKSHRRHRHRGH KHRKRDRERDSGLEDGRESPSFDTPSQRVQFILGTEDDDEEHIPHDLFTELDEICWREGEDAEWRETARW LKFEEDVEDGGERWSKPYVATLSLHSLFELRSCILNGTVLLDMHANTLEEIADMVLDQQVSSGQLNEDVR HRVHEALMKQHHHQNQKKLTNRIPIVRSFADIGKKQSEPNSMDKNAGQVVSPQSAPACVENKNDVSRENS TVDFSKVDLHFMKKIPPGAEASNILVGELEFLDRTVVAFVRLSPAVLLQGLAEVPIPTRFLFILLGPLGK GQQYHEIGRSIATLMTDEVFHDVAYKAKDRNDLVSGIDEFLDQVTVLPPGEWDPSIRIEPPKNVPSQEKR KIPAVPNGTAAHGEAEPHGGHSGPELQRTGRIFGGLILDIKRKAPYFWSDFRDAFSLQCLASFLFLYCAC MSPVITFGGLLGEATEGRISAIESLFGASMTGIAYSLFGGQPLTILGSTGPVLVFEKILFKFCKEYGLSY LSLRASIGLWTATLCIILVATDASSLVCYITRFTEEAFASLICIIFIYEALEKLFELSEAYPINMHNDLE LLTQYSCNCVEPHNPSNGTLKEWRESNISASDIIWENLTVSECKSLHGEYVGRACGHDHPYVPDVLFWSV ILFFSTVTLSATLKQFKTSRYFPTKVRSIVSDFAVFLTILCMVLIDYAIGIPSPKLQVPSVFKPTRDDRG WFVTPLGPNPWWTVIAAIIPALLCTILIFMDQQITAVIINRKEHKLKKGCGYHLDLLMVAVMLGVCSIMG LPWFVAATVLSITHVNSLKLESECSAPGEQPKFLGIREQRVTGLMIFILMGSSVFMTSILKFIPMPVLYG VFLYMGASSLKGIQFFDRIKLFWMPAKHQPDFIYLRHVPLRKVHLFTIIQMSCLGLLWIIKVSRAAIVFP MMVLALVFVRKLMDLLFTKRELSWLDDLMPESKKKKLEDAEKEEEQSMLAMEDEGTVQLPLEGHYRDDPS VINISDEMSKTALWRNLLITADNSKDKESSFPSKSIESRKEKKADSGKGVDRETCL
|