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Report for CCDS86966.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86966.1 Public Homo sapiens 20 OSBPL2 24 110 108 CCDS HistoryNCBI Gene:9885Re-query CCDS DB by CCDS ID:86966.1Re-query CCDS DB by GeneID:9885See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86966.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000645442.1 ENSP00000494921.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645442.1Link to Ensembl Protein Viewer:ENSP00000494921.1Re-query CCDS DB by Nucleotide ID:ENST00000645442Re-query CCDS DB by Protein ID:ENSP00000494921
Original member Current member NCBI NM_001363878.2 NP_001350807.1 Accepted alive Link to Nucleotide Sequence:NM_001363878.2Link to Protein Sequence:NP_001350807.1Re-query CCDS DB by Nucleotide ID:NM_001363878Re-query CCDS DB by Protein ID:NP_001350807Link to BLAST:NP_001350807.1

Chromosomal Locations for CCDS 86966.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 62272143 62272259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62273309 62273406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62279157 62279339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62281058 62281165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62281790 62281879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62284046 62284169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62286583 62286711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62289207 62289330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62291703 62291793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62293785 62293887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGCCAATCGCCTTCAACGAGCCTCTGAGCTTCTTGCAGCGGATCACGGAGTACATGGAGCACGTGTACC
TCATCCACAGGGCCTCCTGCCAGCCCCAGCCCCTGGAGAGGATGCAGTCTGTGGCTGCTTTTGCTGTTTC
GGCTGTGGCTTCCCAGTGGGAGAGGACCGGCAAACCATTTAATCCACTCTTGGGAGAAACGTATGAATTA
ATCAGGGAAGATTTAGGATTCAGATTTATATCGGAACAGGTCAGTCACCACCCCCCCATCAGTGCGTTCC
ACTCGGAAGGTCTCAACCATGACTTCCTGTTCCATGGCTCCATCTACCCCAAGCTCAAGTTCTGGGGCAA
AAGCGTGGAGGCGGAGCCCCGAGGCACCATCACCCTGGAGCTGCTCAAACATAATGAAGCCTACACCTGG
ACCAACCCCACCTGCTGCGTCCACAACGTCATCATCGGGAAGCTGTGGATAGAGCAGTATGGGACAGTGG
AGATTTTAAACCACAGAACTGGACATAAGTGTGTGCTTCACTTTAAACCGTGTGGATTATTTGGAAAAGA
ACTTCACAAGGTGGAAGGACACATTCAAGACAAAAACAAAAAGAAGCTCTTTATGATCTATGGCAAATGG
ACGGAATGTTTGTGGGGCATAGATCCTGTTTCGTATGAATCCTTCAAGAAGCAGGAGAGGAGAGGTGACC
ACCTGAGAAAGGCCAAGCTGGATGAAGACTCCGGGAAGGCTGACAGCGACGTGGCTGACGACGTGCCTGT
GGCCCAGGAGACCGTGCAGGTCATTCCTGGCAGCAAGCTGCTCTGGAGGATCAACACCCGGCCCCCCAAC
TCTGCCCAGATGTATAATTTCACCAGTTTCACTGTGAGCCTCAACGAGCTGGAGACAGGCATGGAGAAGA
CCCTGCCACCCACGGACTGCCGCCTGCGCCCTGACATCCGCGGCATGGAGAATGGCAACATGGATCTGGC
CAGCCAGGAGAAGGAGCGGCTGGAGGAGAAGCAGAGAGAAGCACGGAGGGAGCGGGCCAAGGAGGAGGCA
GAGTGGCAGACGAGGTGGTTCTACCCAGGCAATAACCCCTACACTGGGACCCCCGACTGGTTGTATGCAG
GGGATTACTTTGAGCGGAATTTCTCCGACTGCCCAGATATCTACTGA

Translation (388 aa):
MPIAFNEPLSFLQRITEYMEHVYLIHRASCQPQPLERMQSVAAFAVSAVASQWERTGKPFNPLLGETYEL
IREDLGFRFISEQVSHHPPISAFHSEGLNHDFLFHGSIYPKLKFWGKSVEAEPRGTITLELLKHNEAYTW
TNPTCCVHNVIIGKLWIEQYGTVEILNHRTGHKCVLHFKPCGLFGKELHKVEGHIQDKNKKKLFMIYGKW
TECLWGIDPVSYESFKKQERRGDHLRKAKLDEDSGKADSDVADDVPVAQETVQVIPGSKLLWRINTRPPN
SAQMYNFTSFTVSLNELETGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKERLEEKQREARRERAKEEA
EWQTRWFYPGNNPYTGTPDWLYAGDYFERNFSDCPDIY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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