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Report for CCDS87067.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87067.1 Public Homo sapiens 3 CTNNB1 24 110 108 CCDS HistoryNCBI Gene:1499Re-query CCDS DB by CCDS ID:87067.1Re-query CCDS DB by GeneID:1499See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87067.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000453024.6 ENSP00000411226.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453024.6Link to Ensembl Protein Viewer:ENSP00000411226.1Re-query CCDS DB by Nucleotide ID:ENST00000453024Re-query CCDS DB by Protein ID:ENSP00000411226
Original member Current member EBI ENST00000645493.1 ENSP00000494467.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645493.1Link to Ensembl Protein Viewer:ENSP00000494467.1Re-query CCDS DB by Nucleotide ID:ENST00000645493Re-query CCDS DB by Protein ID:ENSP00000494467
Original member Current member EBI ENST00000644524.1 ENSP00000494780.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000644524.1Link to Ensembl Protein Viewer:ENSP00000494780.1Re-query CCDS DB by Nucleotide ID:ENST00000644524Re-query CCDS DB by Protein ID:ENSP00000494780
Original member Current member EBI ENST00000646174.1 ENSP00000495161.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646174.1Link to Ensembl Protein Viewer:ENSP00000495161.1Re-query CCDS DB by Nucleotide ID:ENST00000646174Re-query CCDS DB by Protein ID:ENSP00000495161
Original member Current member EBI ENST00000645900.1 ENSP00000495286.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645900.1Link to Ensembl Protein Viewer:ENSP00000495286.1Re-query CCDS DB by Nucleotide ID:ENST00000645900Re-query CCDS DB by Protein ID:ENSP00000495286
Original member Current member EBI ENST00000646116.1 ENSP00000495426.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646116.1Link to Ensembl Protein Viewer:ENSP00000495426.1Re-query CCDS DB by Nucleotide ID:ENST00000646116Re-query CCDS DB by Protein ID:ENSP00000495426
Original member Current member EBI ENST00000644678.1 ENSP00000495794.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000644678.1Link to Ensembl Protein Viewer:ENSP00000495794.1Re-query CCDS DB by Nucleotide ID:ENST00000644678Re-query CCDS DB by Protein ID:ENSP00000495794
Original member Current member EBI ENST00000646381.1 ENSP00000496067.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646381.1Link to Ensembl Protein Viewer:ENSP00000496067.1Re-query CCDS DB by Nucleotide ID:ENST00000646381Re-query CCDS DB by Protein ID:ENSP00000496067
Original member Current member EBI ENST00000642836.1 ENSP00000496295.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642836.1Link to Ensembl Protein Viewer:ENSP00000496295.1Re-query CCDS DB by Nucleotide ID:ENST00000642836Re-query CCDS DB by Protein ID:ENSP00000496295
Original member Current member NCBI NM_001330729.2 NP_001317658.1 Accepted alive Link to Nucleotide Sequence:NM_001330729.2Link to Protein Sequence:NP_001317658.1Re-query CCDS DB by Nucleotide ID:NM_001330729Re-query CCDS DB by Protein ID:NP_001317658Link to BLAST:NP_001317658.1

Chromosomal Locations for CCDS 87067.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 41224534 41224753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41224954 41225207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41225334 41225572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41225660 41225861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41227208 41227352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41233341 41233444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41233529 41233867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41234139 41234297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41235724 41235843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41236349 41236499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41236588 41236709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41238016 41238076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 41239134 41239342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2325 nt):
ATGGAGTTGGACATGGCCATGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTTACC
TGGACTCTGGAATCCATTCTGGTGCCACTACCACAGCTCCTTCTCTGAGTGGTAAAGGCAATCCTGAGGA
AGAGGATGTGGATACCTCCCAAGTCCTGTATGAGTGGGAACAGGGATTTTCTCAGTCCTTCACTCAAGAA
CAAGTAGCTGATATTGATGGACAGTATGCAATGACTCGAGCTCAGAGGGTACGAGCTGCTATGTTCCCTG
AGACATTAGATGAGGGCATGCAGATCCCATCTACACAGTTTGATGCTGCTCATCCCACTAATGTCCAGCG
TTTGGCTGAACCATCACAGATGCTGAAACATGCAGTTGTAAACTTGATTAACTATCAAGATGATGCAGAA
CTTGCCACACGTGCAATCCCTGAACTGACAAAACTGCTAAATGACGAGGACCAGGTGGTGGTTAATAAGG
CTGCAGTTATGGTCCATCAGCTTTCTAAAAAGGAAGCTTCCAGACACGCTATCATGCGTTCTCCTCAGAT
GGTGTCTGCTATTGTACGTACCATGCAGAATACAAATGATGTAGAAACAGCTCGTTGTACCGCTGGGACC
TTGCATAACCTTTCCCATCATCGTGAGGGCTTACTGGCCATCTTTAAGTCTGGAGGCATTCCTGCCCTGG
TGAAAATGCTTGGTTCACCAGTGGATTCTGTGTTGTTTTATGCCATTACAACTCTCCACAACCTTTTATT
ACATCAAGAAGGAGCTAAAATGGCAGTGCGTTTAGCTGGTGGGCTGCAGAAAATGGTTGCCTTGCTCAAC
AAAACAAATGTTAAATTCTTGGCTATTACGACAGACTGCCTTCAAATTTTAGCTTATGGCAACCAAGAAA
GCAAGCTCATCATACTGGCTAGTGGTGGACCCCAAGCTTTAGTAAATATAATGAGGACCTATACTTACGA
AAAACTACTGTGGACCACAAGCAGAGTGCTGAAGGTGCTATCTGTCTGCTCTAGTAATAAGCCGGCTATT
GTAGAAGCTGGTGGAATGCAAGCTTTAGGACTTCACCTGACAGATCCAAGTCAACGTCTTGTTCAGAACT
GTCTTTGGACTCTCAGGAATCTTTCAGATGCTGCAACTAAACAGGAAGGGATGGAAGGTCTCCTTGGGAC
TCTTGTTCAGCTTCTGGGTTCAGATGATATAAATGTGGTCACCTGTGCAGCTGGAATTCTTTCTAACCTC
ACTTGCAATAATTATAAGAACAAGATGATGGTCTGCCAAGTGGGTGGTATAGAGGCTCTTGTGCGTACTG
TCCTTCGGGCTGGTGACAGGGAAGACATCACTGAGCCTGCCATCTGTGCTCTTCGTCATCTGACCAGCCG
ACACCAAGAAGCAGAGATGGCCCAGAATGCAGTTCGCCTTCACTATGGACTACCAGTTGTGGTTAAGCTC
TTACACCCACCATCCCACTGGCCTCTGATAAAGGCTACTGTTGGATTGATTCGAAATCTTGCCCTTTGTC
CCGCAAATCATGCACCTTTGCGTGAGCAGGGTGCCATTCCACGACTAGTTCAGTTGCTTGTTCGTGCACA
TCAGGATACCCAGCGCCGTACGTCCATGGGTGGGACACAGCAGCAATTTGTGGAGGGGGTCCGCATGGAA
GAAATAGTTGAAGGTTGTACCGGAGCCCTTCACATCCTAGCTCGGGATGTTCACAACCGAATTGTTATCA
GAGGACTAAATACCATTCCATTGTTTGTGCAGCTGCTTTATTCTCCCATTGAAAACATCCAAAGAGTAGC
TGCAGGGGTCCTCTGTGAACTTGCTCAGGACAAGGAAGCTGCAGAAGCTATTGAAGCTGAGGGAGCCACA
GCTCCTCTGACAGAGTTACTTCACTCTAGGAATGAAGGTGTGGCGACATATGCAGCTGCTGTTTTGTTCC
GAATGTCTGAGGACAAGCCACAAGATTACAAGAAACGGCTTTCAGTTGAGCTGACCAGCTCTCTCTTCAG
AACAGAGCCAATGGCTTGGAATGAGACTGCTGATCTTGGACTTGATATTGGTGCCCAGGGAGAACCCCTT
GGATATCGCCAGGATGATCCTAGCTATCGTTCTTTTCACTCTGGTGGATATGGCCAGGATGCCTTGGGTA
TGGACCCCATGATGGAACATGAGATGGGTGGCCACCACCCTGGTGCTGACTATCCAGTTGATGGGCTGCC
AGATCTGGGGCATGCCCAGGACCTCATGGATGGGCTGCCTCCAGGTGACAGCAATCAGCTGGCCTGGTTT
GATACTGACCTGTAA

Translation (774 aa):
MELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQGFSQSFTQE
QVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDAAHPTNVQRLAEPSQMLKHAVVNLINYQDDAE
LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGT
LHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLN
KTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAI
VEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNL
TCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL
LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRME
EIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGAT
APLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMAWNETADLGLDIGAQGEPL
GYRQDDPSYRSFHSGGYGQDALGMDPMMEHEMGGHHPGADYPVDGLPDLGHAQDLMDGLPPGDSNQLAWF
DTDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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