NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS87094.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87094.1 Public Homo sapiens 3 TASOR 24 110 108 CCDS HistoryNCBI Gene:23272Re-query CCDS DB by CCDS ID:87094.1Re-query CCDS DB by GeneID:23272See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87094.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355628.9 ENSP00000347845.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355628.9Link to Ensembl Protein Viewer:ENSP00000347845.5Re-query CCDS DB by Nucleotide ID:ENST00000355628Re-query CCDS DB by Protein ID:ENSP00000347845
Original member Current member NCBI NM_001363940.1 NP_001350869.1 Accepted alive Link to Nucleotide Sequence:NM_001363940.1Link to Protein Sequence:NP_001350869.1Re-query CCDS DB by Nucleotide ID:NM_001363940Re-query CCDS DB by Protein ID:NP_001350869Link to BLAST:NP_001350869.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350869.1 1609 Q9UK61-4 1609 100% 0 0

Chromosomal Locations for CCDS 87094.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 56623037 56623566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56624479 56624643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56624828 56625006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56627037 56627145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56627582 56627741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56628492 56628614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56633044 56633843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56639986 56640130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56641349 56641752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56646522 56647223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56648822 56648893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56648985 56649057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56660731 56660834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56660914 56661017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56662385 56662490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56663541 56663572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56666260 56666384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56668397 56668558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56669700 56669791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56670073 56670145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56671600 56671692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56673580 56673725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56682676 56683006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4830 nt):
ATGGCGACTGCTGTGGAGACGGAGGCCTGTCAGCCGACGGATGCGAGTTGGGAAAGTGGCGGCGGCGGAG
ACGACGAGATGAAGCAGGCGCTTCCGGAGCTTGAGTCCTCCCAACAAAATGGCGGCGGCGGCGGCCTCAA
CATCGCTGAGCCCAGCGGCGGCGCTGGGCGTGAGGAGAACGCGGGGGCCGAGGCCGCCCAGAGCCTCAGC
CACGAGCAGCCTCAGGACTCCTCTGAGGCGGGCGCGGCCGCCCTGCCCAGAGGCCCCGAAGAGCCCGAAA
GGCCTGTTAGGAGGAGTTTTCAGATCCCCAGGAAGAGCAGAGAAAAGAAAGCACTTTTCCAGCCATTAAC
TCCAGGCTCTCGAGAATTTGAAGATGTTGTAAATATTCTCCATTCTTCTTACCTTGAACCAACCTCAGTA
ACAAATTTTAACTACAGACGTGCTTGCTTGGTACACAATGAGCTTTTGGAAAAGGAGTTTACAGAAAAGC
GAAGAGAACTGAAGTTTGATGGTCGTTTAGATAAGGAACTTTCAGAATCCTATGCATTTCTGATGGTTGA
TCGATACCAGGTTCAAACCATATGTGAAAAAGGATTACATGTGGGTCAGTCCAAAATAACAATTCTTGGC
AGTCCTTCCATGGGTGTCTATCTTTCTAGGTATGCTGATTTATTACAAGCGAATCCTTTGGACACGGGGG
CAATGGGTGATGTTGTTATTTTTAAAATAATGAAGGGTAAAATAAAGAGTATATATGACCCCATGGGTGT
AAAAAGTTTGGAATCTATGTTAAATAAGAGTGCTTTGGACCCCACACCAAAGCATGAATGTCACGTGTCA
AAGAATGCCAATCGAATTACATCACTTTTGGCTTACAGAGCCTATGAGCTTACTCAGTATTATTTTTATG
AGTATGGCTTTGATGAGCTAAGGCGAAGACCAAGACACGTTTGTCCATATGCAGTTGTGTCTTTTACTTA
CAAAGATGATATACAAACTCCGAAGTTTGTACCTTCATCAAGATCTAACAGCTTTAATACAGATAGAAAC
ATAGATAAATATAACTATACCTTGTGGAAAGGACAGCTTTTAAATAAAGGAAAACTTTTGTGTTATATTT
CTCTGAGGTCAGCCACTCGTGCTTTTTTGCCTATCAAACTACCTGAGAAATTAGATGTTGAAACAGTTAT
GAGTATTGATCATCTGAAACAGAAAATCCCTCCAGCACTGTTTTATAAGGAAACATACTTAGGTCCAAAT
GAAGTTTTGAAGAATGGAATGTATTGCAGCCTTTATGAAGTTGTGGAAAAGACAAGAATTGGAAGTAACA
TGGAGAGTTTACTGCAAAAACTAGACAGAGAAAAACTTGTTCTTGTTAAACCTTTGGGAGACCGAGGATA
CCTTTTTCTTCTCTCCCCTTATCAGATGGTTCCTCCATATGAATATCAGACTGCCAAGTCTCGAGTCCTA
CATGCTTTGTTTCTATTTCAAGAACCTAGAAGCATAGTTACTTCACAAAAAGGTTCAACCAATGCAGCAC
CACAGGAGAGGCATGAGAGCATGCCAGATGTATTAAAAATAGCTCAGTTTTTACAATTTTCTTTGATTCA
GTGTCGAAAGGAATTCAAAAATATAAGCGCCATAAATTTTCATTCTGTTGTTGAAAAGTATGTAAGTGAA
TTTTTTAAGCGAGGTTTTGGTTCAGGTAAACGAGAGTTTATTATGTTTCCATATGATTCACGATTAGATG
ATAAAAAATTCTTATACTCAGCTCCCAGAAATAAATCCCATATTGATACTTGTTTGCATGCCTATATTTT
TCGGCCTGAAGTGTATCAGTTACCTATTTGTAAATTAAAAGAACTATTTGAAGAAAATAGAAAACTTCAG
CAGTTTAGTCCACTTTCAGATTATGAAGGTCAAGAAGAAGAAATGAATGGTACAAAAATGAAATTTGGAA
AACGAAATAACTCAAGAGGTGAAGCCATTATATCTGGAAAGCAAAGATCATCTCATTCTTTGGATTATGA
TAAGGATAGAGTCAAAGAATTGATTAATTTAATTCAGTGTAGGAAAAAGAGTGTGGGTGGGGACTCAGAC
ACAGAAGATATGAGAAGCAAAACTGTCTTGAAGAGGAAGCTTGAGGATCTACCTGAAAATATGAGAAAGC
TCGCCAAAACCAGTAATTTATCTGAAAATTGCCATCTGTATGAAGAGTCTCCACAGCCTATTGGCTCACT
TGGACATGATGCTGACTTGAGGCGGCAGCAGCAGGATACCTGTAACTCCGGCATTGCTGACATCCATAGG
CTGTTTAATTGGTTATCAGAAACACTAGCAAATGCGCGCCATTCTGATGCATCTCTGACAGACACAGTCA
ACAAAGCCTTAGGATTGAGCACTGATGATGCCTATGAAGAGCTGAGGCAAAAACATGAGTATGAGTTGAA
CTCTACCCCAGATAAGAAAGACTATGAGCAGCCTACTTGTGCAAAAGTTGAAAATGCACAGTTTAAGGGT
ACTCAGAGCTTATTACTAGAAGTTGATGCAACATCTAAGTATTCTGTTGCTATTTCTACCAGCGAAGTGG
GCACTGACCATAAGCTACATTTGAAAGAAGATCCAAATTTAATTAGCGTGAATAATTTTGAAGATTGCAG
TTTGTGTCCCAGTGTTCCCATTGAACATGGATTTCGTAGACAACAGTCTAAGTCAAATAATGTTGAAGAG
ACTGAAATACATTGGAAACTGATTCCAATTACAGACACACTAAAGGGCACCACTGAGGATGACGTGTTGA
CAGGTCAGGTGGAGGAGCAGTGTGTGCCAGCAGCAGAGGCAGAGCCGCCTGCAGTGAGCGAAACCACAGA
GAGGACAGTGTTAGGAGAGTACAATCTCTTTTCTAGGAAGATAGAAGAGATTTTGAAGCAAAAGAATGTT
TCATATGTCAGTACAGTTTCCACACCTATCTTTTCAACACAAGAGAAGATGAAACGGCTTTCCGAGTTCA
TATATTCTAAGACTTCCAAAGCTGGTGTGCAGGAGTTTGTAGATGGTTTGCATGAGAAGCTAAATACTAT
TATTATTAAAGCATCAGCCAAGGGTGGGAATTTGCCACCAGTCAGTCCTAACGATTCTGGTGCTAAGATA
GCATCGAATCCTCTGGAAAGGCATGTCATACCAGTTTCCTCAAGTGACTTCAACAATAAACATCTCCTTG
AGCCACTGTGTAGTGATCCTTTGAAAGATACCAACTCTGATGAGCAGCATTCCACTTCGGCTTTAACTGA
AGTAGAAATGAACCAGCCTCAACATGCCACAGAGTTAATGGTGACTTCTGATCATATTGTACCTGGTGAT
ATGGCCCGGGAACCAGTAGAAGAAACAACAAAATCCCCCAGTGATGTAAACATTTCTGCTCAACCAGCTC
TTTCAAATTTTATAAGCCAGTTAGAACCTGAAGTATTTAATAGTTTGGTTAAAATCATGAAAGACGTCCA
GAAAAATACTGTGAAATTTTATATTCATGAAGAAGAAGAGAGTGTGCTCTGTAAAGAAATAAAGGAATAT
CTTATCAAATTAGGCAATACAGAATGTCATCCTGAACAGTTTTTGGAAAGAAGATCAAAATTAGATAAAC
TATTGATTATTATTCAAAATGAAGACATTGCAGGTTTCATTCACAAGATACCTGGCTTGGTGACTTTAAA
GAAGCTCCCCTGTGTTAGTTTTGCTGGTGTTGATAGCCTGGATGATGTTAAAAATCATACATACAATGAA
TTATTTGTATCTGGAGGTTTTATCGTATCTGATGAATCAATTCTAAACCCAGAGGTTGTCACAGTTGAGA
ACCTTAAAAATTTTTTGACATTCCTTGAGGAACTTAGTACTCCAGAAGGAAAATGGCAATGGAAAGTCCA
CTGTAAATTTCAGAAGAAACTAAAGGAACTAGGCAGATTGAATGCTAAAGCTCTAAGTCTGTTGACGCTT
CTGAATGTCTATCAGAAGAAACATCTGGTTGAAATTTTGTCATACCACAATTGTGATTCACAAACTCGAA
ATGCTCCAGAATTGGATTGCCTTATCAGACTTCAGGCTCAGAACATACAGCAACGACACATAGTCTTTTT
AACAGAGAAGAACATCAAGATGCTTTCCAGTTATACAGATAATGGAATAGTGGTTGCAACTGCTGAAGAC
TTCATGCAAAACTTTAAAAATCTTGTGGGCTATCACAATTCAATCACAGAAGAAAACCTTCCACAGCTTG
GTGCTAATGAGAATCTTGAGTCGCAGTCAGCTCTTTTAGAAAACGATGAAAAGGATGAAGAGGATATGTC
TCTGGATTCAGGGGATGAAATCTCACATATAGAAGTATGCAGCAATTTTCATTCAGAAATATGGGAGAAA
GAGACCAAAGGATCACGTGGAACAGATCAAAAAAAGAATACTCAAATTGAGTTGCAATCGTCTCCTGATG
TGCAAAACAGTTTATTAGAAGATAAGACTTACCTTGATTCTGAAGAGAGAACTTCTATTGATATAGTATG
CTCTGAAGGAGAGAACAGCAATTCAACAGAACAAGATTCATATAGTAACTTTCAGGTTTATCATAGTCAA
TTAAATATGTCCCATCAGTTTAGTCATTTTAATGTTCTCACTCATCAGACATTTTTGGGGACACCATATG
CCCTTTCATCAAGTCAGTCTCAAGAAAATGAGAATTACTTCTTATCTGCTTATACTGAAAGCTTGGATAG
AGATAAATCTCCACCTCCCTTAAGTTGGGGGAAAAGTGATTCTTCCAGGCCATATTCACAAGAGAAATAA

Translation (1609 aa):
MATAVETEACQPTDASWESGGGGDDEMKQALPELESSQQNGGGGGLNIAEPSGGAGREENAGAEAAQSLS
HEQPQDSSEAGAAALPRGPEEPERPVRRSFQIPRKSREKKALFQPLTPGSREFEDVVNILHSSYLEPTSV
TNFNYRRACLVHNELLEKEFTEKRRELKFDGRLDKELSESYAFLMVDRYQVQTICEKGLHVGQSKITILG
SPSMGVYLSRYADLLQANPLDTGAMGDVVIFKIMKGKIKSIYDPMGVKSLESMLNKSALDPTPKHECHVS
KNANRITSLLAYRAYELTQYYFYEYGFDELRRRPRHVCPYAVVSFTYKDDIQTPKFVPSSRSNSFNTDRN
IDKYNYTLWKGQLLNKGKLLCYISLRSATRAFLPIKLPEKLDVETVMSIDHLKQKIPPALFYKETYLGPN
EVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKLVLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVL
HALFLFQEPRSIVTSQKGSTNAAPQERHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEKYVSE
FFKRGFGSGKREFIMFPYDSRLDDKKFLYSAPRNKSHIDTCLHAYIFRPEVYQLPICKLKELFEENRKLQ
QFSPLSDYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQCRKKSVGGDSD
TEDMRSKTVLKRKLEDLPENMRKLAKTSNLSENCHLYEESPQPIGSLGHDADLRRQQQDTCNSGIADIHR
LFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYELNSTPDKKDYEQPTCAKVENAQFKG
TQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPNLISVNNFEDCSLCPSVPIEHGFRRQQSKSNNVEE
TEIHWKLIPITDTLKGTTEDDVLTGQVEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNV
SYVSTVSTPIFSTQEKMKRLSEFIYSKTSKAGVQEFVDGLHEKLNTIIIKASAKGGNLPPVSPNDSGAKI
ASNPLERHVIPVSSSDFNNKHLLEPLCSDPLKDTNSDEQHSTSALTEVEMNQPQHATELMVTSDHIVPGD
MAREPVEETTKSPSDVNISAQPALSNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCKEIKEY
LIKLGNTECHPEQFLERRSKLDKLLIIIQNEDIAGFIHKIPGLVTLKKLPCVSFAGVDSLDDVKNHTYNE
LFVSGGFIVSDESILNPEVVTVENLKNFLTFLEELSTPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTL
LNVYQKKHLVEILSYHNCDSQTRNAPELDCLIRLQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVATAED
FMQNFKNLVGYHNSITEENLPQLGANENLESQSALLENDEKDEEDMSLDSGDEISHIEVCSNFHSEIWEK
ETKGSRGTDQKKNTQIELQSSPDVQNSLLEDKTYLDSEERTSIDIVCSEGENSNSTEQDSYSNFQVYHSQ
LNMSHQFSHFNVLTHQTFLGTPYALSSSQSQENENYFLSAYTESLDRDKSPPPLSWGKSDSSRPYSQEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH