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Report for CCDS87115.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87115.1 Public Homo sapiens 3 ZPLD1 24 110 108 CCDS HistoryNCBI Gene:131368Re-query CCDS DB by CCDS ID:87115.1Re-query CCDS DB by GeneID:131368See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87115.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000466937.2 ENSP00000418253.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000466937.2Link to Ensembl Protein Viewer:ENSP00000418253.1Re-query CCDS DB by Nucleotide ID:ENST00000466937Re-query CCDS DB by Protein ID:ENSP00000418253
Original member Current member EBI ENST00000491959.5 ENSP00000420265.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000491959.5Link to Ensembl Protein Viewer:ENSP00000420265.1Re-query CCDS DB by Nucleotide ID:ENST00000491959Re-query CCDS DB by Protein ID:ENSP00000420265
Original member Current member NCBI NM_001329788.2 NP_001316717.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001329788.2Link to Protein Sequence:NP_001316717.1Re-query CCDS DB by Nucleotide ID:NM_001329788Re-query CCDS DB by Protein ID:NP_001316717Link to BLAST:NP_001316717.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316717.1 415 Q8TCW7-1 415 100% 0 0

Chromosomal Locations for CCDS 87115.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 102438488 102438593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 102452919 102453139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 102456193 102456374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 102457781 102457853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 102462281 102462378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 102464171 102464251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 102468964 102469135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 102470394 102470502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 102477012 102477041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 102477443 102477618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1248 nt):
ATGGAACAAATATGGTTGCTGCTGCTTCTAACAATTAGAGTGCTTCCGGGGTCTGCTCAGTTCAACGGCT
ACAACTGTGATGCCAACCTCCACAGTAGATTTCCTGCTGAAAGAGACATCAGTGTCTATTGTGGAGTGCA
GGCTATTACGATGAAGATTAATTTTTGCACGGTACTTTTCTCGGGTTATTCGGAAACAGATCTGGCACTG
AATGGAAGGCATGGGGACTCCCACTGCAGAGGGTTCATCAATAACAACACCTTTCCAGCAGTGGTCATTT
TTATCATCAATCTCAGCACCTTGGAGGGCTGTGGAAACAACCTGGTGGTATCCACAATTCCTGGAGTCAG
TGCTTATGGAAATGCAACTTCAGTGCAAGTAGGAAATATTTCAGGATATATTGATACTCCAGACCCACCA
ACAATCATCAGCTATCTACCTGGGCTTCTTTACAAATTTAGTTGTAGTTATCCATTGGAATACCTGGTTA
ATAATACCCAGCTTGCTTCGTCCTCAGCGGCTATTTCTGTGAGAGAGAACAATGGCACATTTGTCAGCAC
TTTGAACCTGCTCCTTTATAACGATTCAACCTACAACCAGCAGTTAATTATCCCCAGTATAGGATTACCT
TTGAAAACCAAAGTATTTGCAGCTGTCCAAGCCACTAATTTGGATGGCAGATGGAATGTTTTAATGGATT
ATTGCTATACTACCCCATCAGGAAACCCAAATGATGACATTCGATATGATCTTTTCCTTAGCTGTGACAA
GGACCCTCAGACCACCGTCATTGAGAATGGCCGAAGCCAGCGGGGCCGGTTTTCTTTTGAAGTGTTCCGA
TTTGTGAAACACAAGAATCAGAAAATGTCCACTGTCTTCTTGCACTGCGTTACCAAGCTCTGCAGAGCAG
ATGACTGCCCCTTCCTTATGCCGATTTGCAGCCACAGAGAAAGGAGAGATGCTGGGAGGAGGACGACTTG
GAGCCCCCAGAGCTCTTCTGGCAGCGCGGTGCTCTCTGCTGGTCCCATCATTACTCGGAGTGATGAGACT
CCAACCAACAATTCGCAACTTGGTTCTCCAAGTATGCCTCCCTTCCAGCTGAACGCCATCACCAGCGCAC
TGATATCAGGAATGGTCATTCTGGGAGTTACGAGCTTTTCTCTTCTTCTGTGCTCACTGGCCCTTCTGCA
CAGGAAGGGACCCACAAGTTTAGTGTTGAATGGCATAAGAAACCCAGTCTTTGACTGA

Translation (415 aa):
MEQIWLLLLLTIRVLPGSAQFNGYNCDANLHSRFPAERDISVYCGVQAITMKINFCTVLFSGYSETDLAL
NGRHGDSHCRGFINNNTFPAVVIFIINLSTLEGCGNNLVVSTIPGVSAYGNATSVQVGNISGYIDTPDPP
TIISYLPGLLYKFSCSYPLEYLVNNTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLP
LKTKVFAAVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFLSCDKDPQTTVIENGRSQRGRFSFEVFR
FVKHKNQKMSTVFLHCVTKLCRADDCPFLMPICSHRERRDAGRRTTWSPQSSSGSAVLSAGPIITRSDET
PTNNSQLGSPSMPPFQLNAITSALISGMVILGVTSFSLLLCSLALLHRKGPTSLVLNGIRNPVFD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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