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Report for CCDS87261.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87261.1 Public Homo sapiens 4 ABHD18 24 110 108 CCDS HistoryNCBI Gene:80167Re-query CCDS DB by CCDS ID:87261.1Re-query CCDS DB by GeneID:80167See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87261.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000645843.2 ENSP00000496010.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000645843.2Link to Ensembl Protein Viewer:ENSP00000496010.1Re-query CCDS DB by Nucleotide ID:ENST00000645843Re-query CCDS DB by Protein ID:ENSP00000496010
Original member Current member NCBI NM_001358451.3 NP_001345380.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001358451.3Link to Protein Sequence:NP_001345380.1Re-query CCDS DB by Nucleotide ID:NM_001358451Re-query CCDS DB by Protein ID:NP_001345380Link to BLAST:NP_001345380.1

Chromosomal Locations for CCDS 87261.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 127982956 127983047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127984339 127984423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127989721 127989821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128008920 128008998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128009107 128009191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128011673 128011700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128017363 128017501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128020080 128020169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128021137 128021238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128028475 128028853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128030510 128030672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128035762 128035813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1395 nt):
ATGGGTGTGAGCAAGTTAGATATTCTATACCGGAGACTTCTCCTAACAAAACTTTTTATCAGAGGATGGG
GAAGGCCAGAAGATCTCAAAAGACTCTTTGAATTCAGAAAGATGATTGGAAATCGGGAAAGATGCCAGAA
TCTGGTTTCAAGCGATTATCCAGTACACATTGATAAGATTGAAGAGCAATCAGATTGTAAGATCTTAGAT
GGACACTTTGTTTCCCCCATGGCTCACTATGTGCCTGATATCATGCCAATTGAATCTGTTATTGCAAGGT
TCCAATTTATTGTGCCTAAAGAATGGAACAGCAAATATAGACCTGTATGCATTCATCTTGCTGGAACAGG
AGATCATCATTACTGGAGGCGACGAACACTAATGGCCCGTCCTATGATTAAAGAAGCCCGAATGGCTTCT
TTATTGTTAGAAAACCCTTATTATGGCTGCAGGAAACCCAAGGACCAAGTAAGGTCCAGCTTAAAAAATG
TGTCCGACCTTTTTGTGATGGGAGGAGCTCTTGTTTTAGAATCTGCAGCTCTCTTGCACTGGCTAGAGAG
GGAAGGTTACGGCCCTTTAGGAATGACTGGAATATCCATGGGAGGACACATGGCTTCCTTAGCGGTATCC
AACTGGCCTAAGCCCATGCCATTGATTCCATGCCTGTCTTGGTCCACAGCATCTGGGGTCTTCACTACGG
GTGTGTTGAGTAAATCAATTAATTGGAGGGAGCTGGAAAAGCAATATTATACCCAGACAGTTTATGAAGA
AGAAATTATTCACATGCTTGAATACTGTGGAACAGATTCTTTCAAAATGGGACAAGAGTTTGTGAAACAC
TTCACTAGCAGTGCAGACAAGCTAACTAACCTTAATCTGGTTTCCAGAACTTTAAATTTAGATATATCAA
ACCAAGTTGTATCCCAAAAACCTGCTGACTGCCATAATTCTAGCAAAACATCTGTCAGTGCGACATCAGA
AGGACTCTTATTGCAAGATACCTCTAAGATGAAGCGCTTCAATCAAACACTTTCAACCAACAAAAGTGGT
TATACAAGTCGCAACCCTCAGTCATACCACCTACTTAGTAAAGAACAAAGCAGAAACAGTCTTCGGAAAG
AGTCTTTAATATTTATGAAAGGAGTCATGGATGAATGTACTCATGTAGCAAATTTCTCAGTCCCAGTTGA
TCCAAGCCTCATTATAGTGGTTCAAGCCAAAGAAGATGCCTATATTCCACGAACAGGAGTTCGAAGTTTA
CAAGAAATTTGGCCTGGTTGTGAAATCCGATACTTAGAAGGGGGTCATATTAGTGCTTATCTTTTTAAAC
AAGGACTCTTCAGACAAGCCATCTATGATGCATTTGACCGCTTCCTCCATAAATACGCTAACTAG

Translation (464 aa):
MGVSKLDILYRRLLLTKLFIRGWGRPEDLKRLFEFRKMIGNRERCQNLVSSDYPVHIDKIEEQSDCKILD
GHFVSPMAHYVPDIMPIESVIARFQFIVPKEWNSKYRPVCIHLAGTGDHHYWRRRTLMARPMIKEARMAS
LLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALVLESAALLHWLEREGYGPLGMTGISMGGHMASLAVS
NWPKPMPLIPCLSWSTASGVFTTGVLSKSINWRELEKQYYTQTVYEEEIIHMLEYCGTDSFKMGQEFVKH
FTSSADKLTNLNLVSRTLNLDISNQVVSQKPADCHNSSKTSVSATSEGLLLQDTSKMKRFNQTLSTNKSG
YTSRNPQSYHLLSKEQSRNSLRKESLIFMKGVMDECTHVANFSVPVDPSLIIVVQAKEDAYIPRTGVRSL
QEIWPGCEIRYLEGGHISAYLFKQGLFRQAIYDAFDRFLHKYAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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