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Report for CCDS87391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87391.1 Public Homo sapiens 6 KCNK16 24 110 108 CCDS HistoryNCBI Gene:83795Re-query CCDS DB by CCDS ID:87391.1Re-query CCDS DB by GeneID:83795See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000507712.5 ENSP00000423842.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000507712.5Link to Ensembl Protein Viewer:ENSP00000423842.1Re-query CCDS DB by Nucleotide ID:ENST00000507712Re-query CCDS DB by Protein ID:ENSP00000423842
Original member Current member NCBI NM_001363784.1 NP_001350713.1 Accepted alive Link to Nucleotide Sequence:NM_001363784.1Link to Protein Sequence:NP_001350713.1Re-query CCDS DB by Nucleotide ID:NM_001363784Re-query CCDS DB by Protein ID:NP_001350713Link to BLAST:NP_001350713.1

Chromosomal Locations for CCDS 87391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 39315002 39315129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 39316782 39316947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 39317786 39317952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 39319019 39319133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 39322328 39322345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGGAGCAGTTTGTGCAGGTCATCATGGAAGCCTGGGTGAAAGGTGTGAACCCCAAAGGCAACTCTACCA
ACCCCAGCAACTGGGACTTTGGCAGCAGTTTCTTCTTTGCAGGCACAGTCGTCACTACCATAGGATATGG
GAACCTGGCACCCAGCACAGAGGCAGGTCAGGTCTTCTGTGTCTTCTATGCCCTGTTGGGCATCCCGCTT
AACGTGATCTTCCTCAACCACCTGGGCACAGGGCTGCGTGCCCATCTGGCCGCCATTGAAAGATGGGAGG
ACCGTCCCAGGCGCTCCCAGGTACTGCAAGTCCTGGGCCTGGCTCTGTTCCTGACCCTGGGGACGCTGGT
CATTCTCATCTTCCCACCCATGGTCTTCAGCCATGTGGAGGGCTGGAGCTTCAGCGAGGGCTTCTACTTT
GCTTTCATCACTCTCAGCACCATTGGCTTTGGGGACTATGTTGTTGGTCTGAGGCAAGGCTGTGGAGCCA
AGGCGGCTCCAGGCAGGAGACCCAGGAGAGGCTCTACAGCAGCAAGAGGAGTCCAAGTCACACCCCAGGA
CTTCCCCATATCCAAGAAAGGACTGGGAAGCTGA

Translation (197 aa):
MEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPL
NVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYF
AFITLSTIGFGDYVVGLRQGCGAKAAPGRRPRRGSTAARGVQVTPQDFPISKKGLGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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