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Report for CCDS87495.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87495.1 Public Homo sapiens 7 STARD3NL 24 110 108 CCDS HistoryNCBI Gene:83930Re-query CCDS DB by CCDS ID:87495.1Re-query CCDS DB by GeneID:83930See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87495.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000434197.5 ENSP00000394000.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000434197.5Link to Ensembl Protein Viewer:ENSP00000394000.1Re-query CCDS DB by Nucleotide ID:ENST00000434197Re-query CCDS DB by Protein ID:ENSP00000394000
Original member Current member NCBI NM_001363343.2 NP_001350272.1 Accepted alive Link to Nucleotide Sequence:NM_001363343.2Link to Protein Sequence:NP_001350272.1Re-query CCDS DB by Nucleotide ID:NM_001363343Re-query CCDS DB by Protein ID:NP_001350272Link to BLAST:NP_001350272.1
Original member Current member NCBI NM_001363344.2 NP_001350273.1 Accepted alive Link to Nucleotide Sequence:NM_001363344.2Link to Protein Sequence:NP_001350273.1Re-query CCDS DB by Nucleotide ID:NM_001363344Re-query CCDS DB by Protein ID:NP_001350273Link to BLAST:NP_001350273.1
Original member Current member NCBI NM_001363345.2 NP_001350274.1 Accepted alive Link to Nucleotide Sequence:NM_001363345.2Link to Protein Sequence:NP_001350274.1Re-query CCDS DB by Nucleotide ID:NM_001363345Re-query CCDS DB by Protein ID:NP_001350274Link to BLAST:NP_001350274.1
Original member Current member NCBI NM_001363346.2 NP_001350275.1 Accepted alive Link to Nucleotide Sequence:NM_001363346.2Link to Protein Sequence:NP_001350275.1Re-query CCDS DB by Nucleotide ID:NM_001363346Re-query CCDS DB by Protein ID:NP_001350275Link to BLAST:NP_001350275.1
Original member Current member NCBI NM_001363347.2 NP_001350276.1 Accepted alive Link to Nucleotide Sequence:NM_001363347.2Link to Protein Sequence:NP_001350276.1Re-query CCDS DB by Nucleotide ID:NM_001363347Re-query CCDS DB by Protein ID:NP_001350276Link to BLAST:NP_001350276.1

Chromosomal Locations for CCDS 87495.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 38207505 38207729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38214357 38214434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38215028 38215105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38217188 38217305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38219565 38219660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 38228799 38228854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (651 nt):
ATGAACCACCTGCCAGAAGACATGGAGAACGCTCTCACCGGGAGCCAGAGCTCCCATGCTTCTCTGCGCA
ATATCCATTCCATCAACCCCACACAACTCATGGCCAGGATTGAGTCCTATGAAGGAAGGGAAAAGAAAGG
CATATCTGATGTCAGGAGGACTTTCTGTTTGTTTGTCACCTTTGACCTCTTATTCGTAACATTACTGTGG
ATAATAGAGTTAAATGTGAATGGAGGCATTGAGAACACATTAGAGAAGGAGGTGATGCAGTATGACTACT
ATTCTTCATATTTTGATATATTTCTTCTGGCAGTTTTTCGATTTAAAGTGTTAATACTTGCATATGCTGT
GTGCAGACTGCGCCATTGGTGGGCAATAGCGCTTTTCTCTCAAGGGGCTTTTGGCTATGTGCTGCCCATC
ATTTCATTCATCCTTGCCTGGATTGAGACGTGGTTCCTGGATTTCAAAGTGTTACCTCAAGAAGCAGAAG
AAGAAAACAGACTCCTGATAGTTCAGGATGCTTCAGAGAGGGCAGCACTTATACCTGGTGGTCTTTCTGA
TGGTCAGTTTTATTCCCCTCCTGAATCCGAAGCAGGATCTGAAGAAGCTGAAGAAAAACAGGACAGTGAG
AAACCACTTTTAGAACTATGA

Translation (216 aa):
MNHLPEDMENALTGSQSSHASLRNIHSINPTQLMARIESYEGREKKGISDVRRTFCLFVTFDLLFVTLLW
IIELNVNGGIENTLEKEVMQYDYYSSYFDIFLLAVFRFKVLILAYAVCRLRHWWAIALFSQGAFGYVLPI
ISFILAWIETWFLDFKVLPQEAEEENRLLIVQDASERAALIPGGLSDGQFYSPPESEAGSEEAEEKQDSE
KPLLEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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