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Report for CCDS87525.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87525.1 Public Homo sapiens 7 TMEM225B 24 110 108 CCDS HistoryNCBI Gene:100289187Re-query CCDS DB by CCDS ID:87525.1Re-query CCDS DB by GeneID:100289187See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87525.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000453227.5 ENSP00000491691.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453227.5Link to Ensembl Protein Viewer:ENSP00000491691.1Re-query CCDS DB by Nucleotide ID:ENST00000453227Re-query CCDS DB by Protein ID:ENSP00000491691
Original member Current member EBI ENST00000431679.6 ENSP00000492416.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000431679.6Link to Ensembl Protein Viewer:ENSP00000492416.1Re-query CCDS DB by Nucleotide ID:ENST00000431679Re-query CCDS DB by Protein ID:ENSP00000492416
Original member Current member NCBI NM_001195541.3 NP_001182470.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001195541.3Link to Protein Sequence:NP_001182470.1Re-query CCDS DB by Nucleotide ID:NM_001195541Re-query CCDS DB by Protein ID:NP_001182470Link to BLAST:NP_001182470.1
Original member Current member NCBI NM_001195542.3 NP_001182471.1 Accepted alive Link to Nucleotide Sequence:NM_001195542.3Link to Protein Sequence:NP_001182471.1Re-query CCDS DB by Nucleotide ID:NM_001195542Re-query CCDS DB by Protein ID:NP_001182471Link to BLAST:NP_001182471.1
Original member Current member NCBI NM_001195543.3 NP_001182472.1 Accepted alive Link to Nucleotide Sequence:NM_001195543.3Link to Protein Sequence:NP_001182472.1Re-query CCDS DB by Nucleotide ID:NM_001195543Re-query CCDS DB by Protein ID:NP_001182472Link to BLAST:NP_001182472.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182470.1 221 P0DP42 221 100% 0 0
NP_001182471.1 221 P0DP42 221 100% 0 0
NP_001182472.1 221 P0DP42 221 100% 0 0

Chromosomal Locations for CCDS 87525.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 99604389 99604596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99606748 99606894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99607673 99607810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99610393 99610565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (666 nt):
ATGCTGACGTTAGAGGACAAGGACATGAAGGGATTCTCCTGGGCCATAGTCCCAGCCTTAACCTCCCTAG
GCTACCTGATTATACTGGTGGTCTCCATCTTTCCCTTCTGGGTGCGACTGACAAACGAGGAGTCCCACGA
AGTCTTTTTCAGTGGCCTATTTGAGAACTGCTTCAATGCCAAATGCTGGAAGCCTCGACCCTTATCCATT
TACATCATCCTCGGCCGGGTTTTCCTGCTCTCTGCAGTTTTCTTGGCTTTCGTCACCACCTTCATCATGA
TGCCCTTTGCATCCGAGTTCTTCCCGAGGACCTGGAAGCAAAACTTTGTGTTAGCCTGCATCAGCTTCTT
CACAGGGGCCTGTGCCTTCCTGGCTTTGGTGCTGCATGCCCTGGAGATCAAGGCTCTGAGGATGAAGCTC
GGCCCCCTGCAGTTCTCCGTGCTGTGGCCTTACTACGTGCTGGGCTTCGGCATCTTTCTGTTCATAGTGG
CTGGTACCATCTGCCTCATTCAAGAAATGGTTTGCCCTTGCTGGCACTTGTTGTCCACTTCCCAGAGTAT
GGAGGAGGACCACGGGAGCCTGTACCTGGACAATCTGGAGAGTTTGGGAGGAGAACCGAGCTCAGTACAA
AAGGAGACACAGGTGACAGCAGAAACAGTCATCTAG

Translation (221 aa):
MLTLEDKDMKGFSWAIVPALTSLGYLIILVVSIFPFWVRLTNEESHEVFFSGLFENCFNAKCWKPRPLSI
YIILGRVFLLSAVFLAFVTTFIMMPFASEFFPRTWKQNFVLACISFFTGACAFLALVLHALEIKALRMKL
GPLQFSVLWPYYVLGFGIFLFIVAGTICLIQEMVCPCWHLLSTSQSMEEDHGSLYLDNLESLGGEPSSVQ
KETQVTAETVI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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