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Report for CCDS87526.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87526.1 Public Homo sapiens 7 ZSCAN21 24 110 108 CCDS HistoryNCBI Gene:7589Re-query CCDS DB by CCDS ID:87526.1Re-query CCDS DB by GeneID:7589See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87526.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000456748.6 ENSP00000390960.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000456748.6Link to Ensembl Protein Viewer:ENSP00000390960.2Re-query CCDS DB by Nucleotide ID:ENST00000456748Re-query CCDS DB by Protein ID:ENSP00000390960
Original member Current member NCBI NM_001362781.2 NP_001349710.1 Accepted alive Link to Nucleotide Sequence:NM_001362781.2Link to Protein Sequence:NP_001349710.1Re-query CCDS DB by Nucleotide ID:NM_001362781Re-query CCDS DB by Protein ID:NP_001349710Link to BLAST:NP_001349710.1

Chromosomal Locations for CCDS 87526.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100057007 100057405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100057698 100057890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100063788 100063979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100064083 100064651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1353 nt):
ATGATGACCAAGGTACTAGGCATGGCCCCAGTTCTGGGCCCTAGGCCTCCACAGGAGCAGGTGGGGCCTC
TGATGGTAAAAGTCGAGGAGAAAGAAGAGAAAGGCAAGTACCTTCCTAGCCTGGAGATGTTCCGCCAGCG
CTTCAGGCAGTTTGGGTACCATGATACCCCTGGACCCCGAGAGGCCCTGAGCCAACTCCGGGTGCTCTGC
TGTGAGTGGCTGAGGCCCGAGATCCACACCAAGGAGCAGATCCTGGAGCTACTGGTGCTGGAGCAGTTCC
TGACCATCCTGCCCCAGGAGCTCCAGGCCTGGGTGCAGGAGCATTGCCCGGAGAGCGCTGAAGAGGCTGT
CACTCTCCTCGAAGATCTGGAGCGGGAACTGGATGAGCCAGGACACCAGGTCTCAACTCCTCCAAACGAA
CAGAAACCGGTGTGGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCAGCATGCAGCCAC
AGCCCTTGGAGACCAGTCACAAATACGAGTCTTGGGGGCCCCTGTACATCCAAGAGTCTGGTGAGGAGCA
GGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGATTGCAGATTGAGTACCCAGCACGAGGAATCAGCAGAT
GAGCAGAAAGGTTCTGAAGCAGAGGGGCTCAAAGGGGATATAATTTCTGTGATTATCGCCAATAAACCTG
AGGCCAGCTTAGAGAGGCAGTGCGTAAACCTTGAAAATGAAAAAGGAACAAAACCCCCTCTTCAAGAGGC
AGGCTCCAAGAAAGGAGAACACACACTGGGGAGAAACCTTACGTGTGCACCAAGTGTGGGAAAGCTTTCA
GCCACAGCTCAAACCTCACCCTCCACTACAGAACACACTTGGTGGACCGGCCCTATGACTGTAAGTGTGG
AAAAGCTTTTGGGCAGAGCTCAGACCTTCTTAAACATCAGAGAATGCACACAGAAGAGGCGCCATATCAG
TGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCGGATCCACACTGGGG
AGAAGCCTTATCAGTGTAACGAATGTGGGAAGAGCTTCAGTCAGCATGCGGGCCTCAGCTCCCACCAGAG
ACTCCACACCGGAGAGAAGCCATATAAGTGTAAGGAGTGTGGGAAAGCCTTCAACCACAGCTCCAACTTC
AATAAACACCACAGAATCCACACCGGGGAAAAGCCCTACTGGTGTCATCACTGTGGAAAGACCTTCTGTA
GCAAGTCCAATCTTTCCAAACATCAGCGAGTCCACACTGGAGAGGGAGAAGCACCGTAACTTTCAAGCGC
TCCTGTTGTTGTCGTTGTTTTAA

Translation (450 aa):
MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPREALSQLRVLC
CEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLLEDLERELDEPGHQVSTPPNE
QKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYIQESGEEQEFAQDPRKVRDCRLSTQHEESAD
EQKGSEAEGLKGDIISVIIANKPEASLERQCVNLENEKGTKPPLQEAGSKKGEHTLGRNLTCAPSVGKLS
ATAQTSPSTTEHTWWTGPMTVSVEKLLGRAQTFLNIRECTQKRRHISAKIVARLSAGKAASFVTIGSTLG
RSLISVTNVGRASVSMRASAPTRDSTPERSHISVRSVGKPSTTAPTSINTTESTPGKSPTGVITVERPSV
ASPIFPNISESTLEREKHRNFQALLLLSLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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