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Report for CCDS87527.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87527.1 Public Homo sapiens 7 AP4M1 24 110 108 CCDS HistoryNCBI Gene:9179Re-query CCDS DB by CCDS ID:87527.1Re-query CCDS DB by GeneID:9179See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87527.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000429084.5 ENSP00000403663.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000429084.5Link to Ensembl Protein Viewer:ENSP00000403663.1Re-query CCDS DB by Nucleotide ID:ENST00000429084Re-query CCDS DB by Protein ID:ENSP00000403663
Original member Current member NCBI NM_001363671.2 NP_001350600.1 Accepted alive Link to Nucleotide Sequence:NM_001363671.2Link to Protein Sequence:NP_001350600.1Re-query CCDS DB by Nucleotide ID:NM_001363671Re-query CCDS DB by Protein ID:NP_001350600Link to BLAST:NP_001350600.1

Chromosomal Locations for CCDS 87527.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100101715 100101772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100101880 100101989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100102675 100102781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100102864 100102960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100103409 100103519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100103612 100103692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100104092 100104154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100104874 100104940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100105045 100105098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100105240 100105346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100105445 100105539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100105959 100106003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100106241 100106291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100106403 100106514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100106658 100106882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1383 nt):
ATGATTTCCCAATTCTTCATTCTGTCCTCCAAGGGGGACCCGCTCATCTACAAAGACTTCCGCGGGGACA
GTGGCGGCCGGGATGTGGCCGAGCTCTTCTACCGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCGGT
TGTCATGGTAACCAGTGGCGGGAGGCGGCATCACCATGGCCGTCATTTCATTCACATCAGACACAGCGGC
CTCTATTTGGTGGTCACAACTTCAGAAAACGTTTCTCCCTTCAGCCTCCTAGAACTGCTCTCCAGGTTGG
CCACCCTTCTGGGCGATTACTGTGGCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATA
CGAACTCCTGGATGAAGTGCTGGACTATGGCTATGTACAGACCACATCCACGGAGATGCTGAGGAATTTC
ATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTTGTTTGGGG
CTGAGACACAACAGAGCAAAGTGGCCCCCAGCAGTGCAGCCAGCCGCCCCGTCCTGTCCAGTCGCTCTGA
CCAGAGCCAAAAGAATGAAGTTTTTTTGGATGTGGTCGAGAGATTGTCTGTACTGATAGCATCTAATGGA
TCCCTGCTGAAGGTGGATGTGCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGAGATGC
GCATTGGCTTGACGGAAGAGTTTTGTGTGGGGAAGTCAGAGCTGAGAGGTTATGGGCCAGGAATCCGGGT
CGATGAAGTCTCGTTTCACAGCTCTGTGAATCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAA
CCACCTCAGGGCGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCTTCC
GGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTCAGGCCGGCTCCAGGTTTATCTAAAGTTGCGATGTGA
CCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGTCAGCCTG
TCTCAGGAGCTGAGCAGCCCAGAGCAGAAGGCTGAGCTGGCAGAGGGAGCCCTTCGCTGGGACCTGCCTC
GGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATGGACGTCCCAGGGCCCCCAGGACCTCCCAG
CCATGGGCTCTCCACCTCGGCCTCTCCTCTGGGGCTGGGCCCTGCCAGTCTCTCCTTCGAGCTTCCCCGG
CACACGTGCTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCC
ACAAGTGGGTGCGACACCTAAGCCACAGCGACGCCTATGTCATTCGGATCTGA

Translation (460 aa):
MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGDESPVVMVTSGGRRHHHGRHFIHIRHSG
LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQTTSTEMLRNF
IQTEAVVSKPFSLFDLSSVGLFGAETQQSKVAPSSAASRPVLSSRSDQSQKNEVFLDVVERLSVLIASNG
SLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVGKSELRGYGPGIRVDEVSFHSSVNLDEFESHRILRLQ
PPQGELTVMRYQLSDDLPSPLPFRLFPSVQWDRGSGRLQVYLKLRCDLLSKSQALNVRLHLPLPRGVVSL
SQELSSPEQKAELAEGALRWDLPRVQGGSQLSGLFQMDVPGPPGPPSHGLSTSASPLGLGPASLSFELPR
HTCSGLQVRFLRLAFRPCGNANPHKWVRHLSHSDAYVIRI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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