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Report for CCDS87658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87658.1 Public Homo sapiens 9 ENTREP1 24 110 108 CCDS HistoryNCBI Gene:9413Re-query CCDS DB by CCDS ID:87658.1Re-query CCDS DB by GeneID:9413See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87658.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303068.14 ENSP00000304435.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000303068.14Link to Ensembl Protein Viewer:ENSP00000304435.8Re-query CCDS DB by Nucleotide ID:ENST00000303068Re-query CCDS DB by Protein ID:ENSP00000304435
Original member Current member NCBI NM_001347995.2 NP_001334924.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001347995.2Link to Protein Sequence:NP_001334924.1Re-query CCDS DB by Nucleotide ID:NM_001347995Re-query CCDS DB by Protein ID:NP_001334924Link to BLAST:NP_001334924.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334924.1 603 Q15884-4 603 100% 0 0

Chromosomal Locations for CCDS 87658.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 69325310 69325723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69336213 69336269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69371499 69371609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69375736 69375864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69377370 69377477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69377611 69377744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69383630 69383759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69383947 69384025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69385795 69385947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69388158 69388450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69391601 69391804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1812 nt):
ATGTCCCTGCCCGTGGTGCTCCCGGGCTCCTGCTGCCCCGTGGCTGGGCTTTCGGGTGGGCCGCAGGCCG
GGGGCCCGGGCGCCGCTGCCGCCGCCGCTCAGGAGCCGCCGCTGCCCCCGCTGCGGCCGCGCTGGCCCCG
GGGCGCGCTGCAGCCCCCGTCGCGGCCTCGCTGCGCGGCCACCGCTGCTGCCGGGGTGCTGGCCGCGCCG
CCGGCGCTCTCCTCCCGCCGGGCAGTCGCCGCCGCTGCCGCCGCGGCCCCGGGCTCCGCGCTGCTGCCCG
CCCGCCCGCTGCTGTCACTTGGGCTGCTTCAGCTGATCTTGGGCTGCTGCATGGTGGCGCTCAGCTTCGG
GGCGCTGTCGCTGAGCAGCTCCCCGCAGGTGAAGAACTCGTGCCCGTTCTGGGCCGGCTCCTCGGTGATA
CTCTCTGGAATCATAGGATTAACAACTTGGAAAAGGCCTATGATACTCCTGGTAAACCTCTTTGTGCTGC
TCTCTGTGGTTTGTGTCCTCTTAAATCTAGCTGGATTTATCCTAGGCTGCCAAGGGGCCCAGTTTGTGTC
CAGCGTGCCCAGGTGTGATCTGGTGGACTTAGGTGAAGGCAAGATTTGCTTCTGTTGTGAAGAATTTCAA
CCAGCCAAGTGCACAGACAAAGAAAATGCCTTGAAACTCTTTCCGGTTCAGCCCTGTAGTGCTGTTCACC
TTCTACTTAAGAAAGTCCTCTTTGCCCTGTGTGCCTTGAATGCCCTGACCACCACCGTCTGCTTGGTGGC
CGCTGCCCTCCGCTACCTCCAGATATTCGCAACCAGGAGATCCTGCATCGATGAATCCCAGATTTCTGCT
GAAGAAGCGGAGGATCATGGACGCATCCCCGACCCTGATGATTTTGTGCCGCCTGTGCCTCCCCCTTCCT
ATTTTGCCACGTTTTACTCGTGCACACCCCGGATGAACCGCAGGATGGTTGGTCCTGATGTTATTCCCCT
GCCACACATCTACGGAGCTCGAATCAAAGGTGTGGAAGTGTTCTGTCCTCTGGATCCCCCGCCGCCATAT
GAAGCTGTGGTGAGCCAGATGGACCAGGAGCAGGGATCTTCATTCCAAATGTCAGAAGGATCAGAAGCTG
CTGTGATCCCATTGGATCTGGGCTGCACACAAGTGACTCAAGATGGGGACATTCCTAACATACCTGCCGA
AGAAAATGCATCCACCTCAACTCCCAGTTCAACCCTGGTGCGTCCTATCAGAAGCCGGAGAGCCCTCCCA
CCCTTGAGGACCAGGTCGAAGAGTGACCCTGTGCTCCATCCTTCTGAGGAGAGAGCTGCCCCAGTGCTCA
GCTGTGAAGCTGCAACACAGACTGAAAGGAGACTGGATCTGGCTGCAGTGACTCTGAGGAGAGGCTTGAG
ATCTAGAGCTTCGCGATGCAGACCGCGGTCTTTGATAGATTACAAATCCTACATGGACACCAAGCTGCTG
GTGGCGAGGTTCCTGGAGCAGTCCTCTTGTACCATGACCCCAGACATCCATGAACTTGTAGAAAACATTA
AATCTGTTTTGAAATCTGATGAGGAGCACATGGAGGAAGCCATCACAAGTGCCAGTTTTCTAGAACAGAT
AATGGCCCCATTGCAGCCCAGCACATCCAGGGCCCACAAGCTGCCCTCGCGGAGACAGCCTGGCCTGCTG
CACCTCCAGAGCTGCGGCGACCTTCACACCTTCACACCAGCGGGGAGGCCCCGAGCCGAGAGGAGGCCCC
GGCGAGTGGAGGCTGAGCGGCCACACAGCCTCATTGGGGTCATCCGAGAGACTGTCCTGTGA

Translation (603 aa):
MSLPVVLPGSCCPVAGLSGGPQAGGPGAAAAAAQEPPLPPLRPRWPRGALQPPSRPRCAATAAAGVLAAP
PALSSRRAVAAAAAAAPGSALLPARPLLSLGLLQLILGCCMVALSFGALSLSSSPQVKNSCPFWAGSSVI
LSGIIGLTTWKRPMILLVNLFVLLSVVCVLLNLAGFILGCQGAQFVSSVPRCDLVDLGEGKICFCCEEFQ
PAKCTDKENALKLFPVQPCSAVHLLLKKVLFALCALNALTTTVCLVAAALRYLQIFATRRSCIDESQISA
EEAEDHGRIPDPDDFVPPVPPPSYFATFYSCTPRMNRRMVGPDVIPLPHIYGARIKGVEVFCPLDPPPPY
EAVVSQMDQEQGSSFQMSEGSEAAVIPLDLGCTQVTQDGDIPNIPAEENASTSTPSSTLVRPIRSRRALP
PLRTRSKSDPVLHPSEERAAPVLSCEAATQTERRLDLAAVTLRRGLRSRASRCRPRSLIDYKSYMDTKLL
VARFLEQSSCTMTPDIHELVENIKSVLKSDEEHMEEAITSASFLEQIMAPLQPSTSRAHKLPSRRQPGLL
HLQSCGDLHTFTPAGRPRAERRPRRVEAERPHSLIGVIRETVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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