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Report for CCDS8791.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8791.1 Public Homo sapiens 12 FAIM2 24 110 108 CCDS HistoryNCBI Gene:23017Re-query CCDS DB by CCDS ID:8791.1Re-query CCDS DB by GeneID:23017See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8791.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320634.8 ENSP00000321951.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320634.8Link to Ensembl Protein Viewer:ENSP00000321951.3Re-query CCDS DB by Nucleotide ID:ENST00000320634Re-query CCDS DB by Protein ID:ENSP00000321951
Original member Current member NCBI NM_012306.4 NP_036438.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012306.4Link to Protein Sequence:NP_036438.2Re-query CCDS DB by Nucleotide ID:NM_012306Re-query CCDS DB by Protein ID:NP_036438Link to BLAST:NP_036438.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036438.2 316 Q9BWQ8-1 316 100% 0 0

Chromosomal Locations for CCDS 8791.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 49870504 49870653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49887386 49887439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49889107 49889202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49889481 49889568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49890117 49890154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49890683 49890722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49891064 49891114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49897031 49897084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49897519 49897583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49897987 49898090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49901130 49901325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49903778 49903792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGACCCAGGGAAAGCTCTCCGTGGCTAACAAGGCCCCTGGGACCGAGGGGCAGCAGCAGGTGCATGGCG
AGAAGAAGGAGGCTCCAGCAGTGCCCTCAGCCCCACCCTCCTATGAGGAAGCCACCTCTGGGGAGGGGAT
GAAGGCAGGGGCCTTCCCCCCAGCCCCCACAGCGGTGCCTCTCCACCCTAGCTGGGCCTATGTGGACCCC
AGCAGCAGCTCCAGCTATGACAACGGTTTCCCCACCGGAGACCATGAGCTCTTCACCACTTTCAGCTGGG
ATGACCAGAAAGTTCGTCGAGTCTTTGTCAGAAAGGTCTACACCATCCTGCTGATTCAGCTGCTGGTGAC
CTTGGCTGTCGTGGCTCTCTTTACTTTCTGTGACCCTGTCAAGGACTATGTCCAGGCCAACCCAGGCTGG
TACTGGGCATCCTATGCTGTGTTCTTTGCAACCTACCTGACCCTGGCTTGCTGTTCTGGACCCAGGAGGC
ATTTCCCCTGGAACCTGATTCTCCTGACCGTCTTTACCCTGTCCATGGCCTACCTCACTGGGATGCTGTC
CAGCTACTACAACACCACCTCCGTGCTGCTGTGCCTGGGCATCACGGCCCTTGTCTGCCTCTCAGTCACC
GTCTTCAGCTTCCAGACCAAGTTCGACTTCACCTCCTGCCAGGGCGTGCTCTTCGTGCTTCTCATGACTC
TTTTCTTCAGCGGACTCATCCTGGCCATCCTCCTACCCTTCCAATATGTGCCCTGGCTCCATGCAGTTTA
TGCAGCACTGGGAGCGGGTGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGA
CGCCACTCGCTGAGCCCTGAGGAGTATATTTTTGGAGCCCTCAACATTTACCTAGACATCATCTATATCT
TCACCTTCTTCCTGCAGCTTTTTGGCACTAACCGAGAATGA

Translation (316 aa):
MTQGKLSVANKAPGTEGQQQVHGEKKEAPAVPSAPPSYEEATSGEGMKAGAFPPAPTAVPLHPSWAYVDP
SSSSSYDNGFPTGDHELFTTFSWDDQKVRRVFVRKVYTILLIQLLVTLAVVALFTFCDPVKDYVQANPGW
YWASYAVFFATYLTLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVLLCLGITALVCLSVT
VFSFQTKFDFTSCQGVLFVLLMTLFFSGLILAILLPFQYVPWLHAVYAALGAGVFTLFLALDTQLLMGNR
RHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTNRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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