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Report for CCDS87919.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87919.1 Public Mus musculus 1 Fcgr3 23 108 98 CCDS HistoryNCBI Gene:14131Re-query CCDS DB by CCDS ID:87919.1Re-query CCDS DB by GeneID:14131See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87919.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000169017.7 ENSMUSP00000131836.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169017.7Link to Ensembl Protein Viewer:ENSMUSP00000131836.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169017Re-query CCDS DB by Protein ID:ENSMUSP00000131836
Original member NCBI NM_001356511.1 NP_001343440.1 Updated not alive Link to Nucleotide Sequence:NM_001356511.1Link to Protein Sequence:NP_001343440.1Re-query CCDS DB by Nucleotide ID:NM_001356511Re-query CCDS DB by Protein ID:NP_001343440
Current member NCBI NM_001356511.2 NP_001343440.1 Accepted alive Link to Nucleotide Sequence:NM_001356511.2Link to Protein Sequence:NP_001343440.1Re-query CCDS DB by Nucleotide ID:NM_001356511Re-query CCDS DB by Protein ID:NP_001343440Link to BLAST:NP_001343440.1

Chromosomal Locations for CCDS 87919.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 171051668 171051852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171053939 171054193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171057691 171057945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171058586 171058606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171059269 171059353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGACTTTGGACACCCAGATGTTTCAGAATGCACACTCTGGAAGCCAATGGCTACTTCCACCACTGACAA
TTCTGCTGCTGTTTGCTTTTGCAGACAGGCAGAGTGCTCTTCCGAAGGCTGTGGTGAAACTGGACCCCCC
ATGGATCCAGGTGCTCAAGGAAGACATGGTGACACTGATGTGCGAAGGGACCCACAACCCTGGGAACTCT
TCTACTCAGTGGTTCCACAACTGGAGTTCCATCCGGAGCCAGGTCCAATCCAGCTACACGTTTAAGGCCA
CAGTCAATGACAGTGGAGAATATCGGTGTCAAATGGAGCAGACCCGCCTCAGCGACCCTGTAGATCTGGG
AGTGATTTCTGACTGGCTGCTGCTCCAGACCCCTCAGCGGGTGTTTCTGGAAGGGGAAACCATCACGCTA
AGGTGCCATAGCTGGAGGAACAAACTACTGAACAGGATCTCGTTCTTCCATAATGAAAAATCCGTGAGGT
ATCATCACTACAAAAGTAATTTCTCTATCCCAAAAGCCAACCACAGTCACAGTGGGGACTACTACTGCAA
AGGAAGTCTAGGAAGTACACAGCACCAGTCCAAGCCTGTCACCATCACTGTCCAAGACCCAGCAACTACA
TCCTCCATCTCTCTAGTCTGGTACCACACTGCTTTCTCCCTAGTGATGTGCCTCCTGTTTGCAGTGGACA
CGGGCCTTTATTTCTATGTACGGAGAAATCTTCAAACCCCGAGGGATTACTGGAGGAAGTCCCTGTCAAT
CAGAAAGCACCAGGCTCCTCAAGACAAGTGA

Translation (266 aa):
MTLDTQMFQNAHSGSQWLLPPLTILLLFAFADRQSALPKAVVKLDPPWIQVLKEDMVTLMCEGTHNPGNS
STQWFHNWSSIRSQVQSSYTFKATVNDSGEYRCQMEQTRLSDPVDLGVISDWLLLQTPQRVFLEGETITL
RCHSWRNKLLNRISFFHNEKSVRYHHYKSNFSIPKANHSHSGDYYCKGSLGSTQHQSKPVTITVQDPATT
SSISLVWYHTAFSLVMCLLFAVDTGLYFYVRRNLQTPRDYWRKSLSIRKHQAPQDK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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