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Report for CCDS8845.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8845.1 Public Homo sapiens 12 SPRYD3 24 110 108 CCDS HistoryNCBI Gene:84926Re-query CCDS DB by CCDS ID:8845.1Re-query CCDS DB by GeneID:84926See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8845.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301463.9 ENSP00000301463.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301463.9Link to Ensembl Protein Viewer:ENSP00000301463.4Re-query CCDS DB by Nucleotide ID:ENST00000301463Re-query CCDS DB by Protein ID:ENSP00000301463
Original member Current member NCBI NM_032840.3 NP_116229.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032840.3Link to Protein Sequence:NP_116229.1Re-query CCDS DB by Nucleotide ID:NM_032840Re-query CCDS DB by Protein ID:NP_116229Link to BLAST:NP_116229.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116229.1 442 Q8NCJ5 442 100% 0 0

Chromosomal Locations for CCDS 8845.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 53065832 53065966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53066314 53066486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53066573 53066692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53067648 53067705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53068155 53068304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53073286 53073471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53074649 53074784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53075095 53075219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53075736 53075811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53077115 53077261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53079311 53079333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1329 nt):
ATGAGGAGGACGCGGCGGCCCCGGTTTGTTCTCATGAACAAGATGGATGACCTCAACCTGCACTACCGGT
TTCTGAATTGGCGCCGGCGGATCCGGGAGATTCGAGAGGTCCGAGCTTTCCGATATCAGGAGAGGTTCAA
ACATATCCTTGTAGATGGAGATACTTTAAGTTATCATGGAAACTCTGGTGAAGTTGGCTGCTACGTGGCT
TCTCGACCCCTGACCAAGGACAGCAATTATTTTGAGGTGTCTATTGTGGACAGTGGAGTCCGGGGCACCA
TTGCTGTGGGGCTGGTCCCTCAGTACTACAGCTTGGATCACCAGCCTGGCTGGTTGCCTGACTCTGTAGC
CTACCATGCTGATGATGGCAAGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAAC
TCCGGGGACCGGATTGGCTGTGGCATTGAGCCTGTGTCCTTTGATGTGCAGACCGCCCAGATCTTCTTCA
CCAAAAATGGGAAGCGGGTGGGCTCTACCATCATGCCCATGTCCCCAGATGGACTGTTCCCAGCAGTGGG
CATGCACTCCCTGGGTGAGGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCCGTGAGGACGACAGCGTC
ATGATGGTGGACAGTTACGAGGATGAATGGGGCCGGCTACATGATGTCAGAGTCTGTGGGACTCTGCTGG
AGTACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGGGCTGGCCCAGGCCCGGCACCCACTCAGCACCCG
CAGCCACTACTTCGAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATCGCCCTGGGGCTGGCACGG
AAGGACTATCCCAAGAACAGGCACCCTGGCTGGAGCAGAGGGTCTGTGGCTTATCATGCAGACGATGGGA
AGATCTTCCATGGCAGTGGTGTGGGGGACCCCTTTGGGCCACGCTGTTACAAAGGGGACATCATGGGCTG
TGGAATCATGTTCCCCCGGGACTACATTTTGGACAGTGAGGGGGACAGTGATGACAGTTGTGACACAGTG
ATCCTGTCTCCGACTGCCCGGGCCGTCCGGAACGTGCGGAATGTCATGTACCTGCACCAGGAAGGGGAAG
AGGAAGAGGAGGAAGAGGAAGAGGAAGAGGATGGGGAAGAGATAGAGCCGGAGCATGAGGGCAGGAAGGT
GGTGGTTTTCTTCACTCGGAATGGCAAGATCATTGGGAAGAAGGATGCTGTTGTTCCTTCTGGAGGCTTC
TTCCCCACCATTGGAATGCTGAGCTGCGGGGAGAAAGTCAAAGTAGATCTGCACCCCTTGAGTGGCTAG

Translation (442 aa):
MRRTRRPRFVLMNKMDDLNLHYRFLNWRRRIREIREVRAFRYQERFKHILVDGDTLSYHGNSGEVGCYVA
SRPLTKDSNYFEVSIVDSGVRGTIAVGLVPQYYSLDHQPGWLPDSVAYHADDGKLYNGRAKGRQFGSKCN
SGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMPMSPDGLFPAVGMHSLGEEVRLHLNAELGREDDSV
MMVDSYEDEWGRLHDVRVCGTLLEYLGKGKSIVDVGLAQARHPLSTRSHYFEVEIVDPGEKCYIALGLAR
KDYPKNRHPGWSRGSVAYHADDGKIFHGSGVGDPFGPRCYKGDIMGCGIMFPRDYILDSEGDSDDSCDTV
ILSPTARAVRNVRNVMYLHQEGEEEEEEEEEEEDGEEIEPEHEGRKVVVFFTRNGKIIGKKDAVVPSGGF
FPTIGMLSCGEKVKVDLHPLSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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