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Report for CCDS89035.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89035.1 Public Mus musculus 17 Rps10 23 108 98 CCDS HistoryNCBI Gene:67097Re-query CCDS DB by CCDS ID:89035.1Re-query CCDS DB by GeneID:67097See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89035.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025052.13 ENSMUSP00000025052.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025052.13Link to Ensembl Protein Viewer:ENSMUSP00000025052.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000025052Re-query CCDS DB by Protein ID:ENSMUSP00000025052
Original member Current member NCBI NM_001364934.1 NP_001351863.1 Accepted alive Link to Nucleotide Sequence:NM_001364934.1Link to Protein Sequence:NP_001351863.1Re-query CCDS DB by Nucleotide ID:NM_001364934Re-query CCDS DB by Protein ID:NP_001351863Link to BLAST:NP_001351863.1

Chromosomal Locations for CCDS 89035.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 27630442 27630506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27632279 27632356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27634072 27634243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27634326 27634475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGTTGATGCCTAAGAAGAATCGGATTGCCATCTACGAACTCCTTTTTAAGGAGGGCGTGATGGTCGCCA
AAAAGGATGTCCACATGCCTAAGCACCCGGAGCTGGCAGACAAAAATGTGCCCAACCTTCATGTAATGAA
GGCCATGCAGTCTCTCAAGTCTCGAGGCTACGTGAAGGAACAGTTTGCTTGGAGACATTTCTACTGGTAC
CTTACGAACGAGGGCATCCAGTATCTCCGAGACTACCTGCACCTACCCCCGGAGATCGTGCCCGCCACCC
TGCGTCGCAGCCGTCCCGAGACCGGCAGGCCTCGGCCCAAAGGTCCAGAGGGTGAGCGACCTGCAAGATT
CACAAGAGGGGAGGCTGACAGAGACACCTACAGAAGGAGCGCTGTGCCCCAGAGGCGGCTTTGGTCGTGG
ACGTGGTCAGCCACCTCAGTGAAGTTGGAGTTTATGTTGTATTGA

Translation (154 aa):
MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWY
LTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKGPEGERPARFTRGEADRDTYRRSAVPQRRLWSW
TWSATSVKLEFMLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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