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Report for CCDS8928.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8928.1 Public Homo sapiens 12 TAC3 24 110 108 CCDS HistoryNCBI Gene:6866Re-query CCDS DB by CCDS ID:8928.1Re-query CCDS DB by GeneID:6866See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8928.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300108.7 ENSP00000300108.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000300108.7Link to Ensembl Protein Viewer:ENSP00000300108.3Re-query CCDS DB by Nucleotide ID:ENST00000300108Re-query CCDS DB by Protein ID:ENSP00000300108
Original member Current member EBI ENST00000415231.1 ENSP00000402995.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000415231.1Link to Ensembl Protein Viewer:ENSP00000402995.1Re-query CCDS DB by Nucleotide ID:ENST00000415231Re-query CCDS DB by Protein ID:ENSP00000402995
Original member Current member EBI ENST00000458521.7 ENSP00000404056.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000458521.7Link to Ensembl Protein Viewer:ENSP00000404056.2Re-query CCDS DB by Nucleotide ID:ENST00000458521Re-query CCDS DB by Protein ID:ENSP00000404056
Original member Current member NCBI NM_013251.4 NP_037383.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013251.4Link to Protein Sequence:NP_037383.1Re-query CCDS DB by Nucleotide ID:NM_013251Re-query CCDS DB by Protein ID:NP_037383Link to BLAST:NP_037383.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037383.1 121 Q9UHF0-1 121 100% 0 0

Chromosomal Locations for CCDS 8928.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57012379 57012452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57012822 57012875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57013359 57013388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57013578 57013671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57015684 57015797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (366 nt):
ATGAGGATCATGCTGCTATTCACAGCCATCCTGGCCTTCAGCCTAGCTCAGAGCTTTGGGGCTGTCTGTA
AGGAGCCACAGGAGGAGGTGGTTCCTGGCGGGGGCCGCAGCAAGAGGGATCCAGATCTCTACCAGCTGCT
CCAGAGACTCTTCAAAAGCCACTCATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGCTAGCACAGAT
CCTAAGGAATCAACATCTCCCGAGAAACGTGACATGCATGACTTCTTTGTGGGACTTATGGGCAAGAGGA
GCGTCCAGCCAGACTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCC
CCCGAGAGCAGAATAG

Translation (121 aa):
MRIMLLFTAILAFSLAQSFGAVCKEPQEEVVPGGGRSKRDPDLYQLLQRLFKSHSSLEGLLKALSQASTD
PKESTSPEKRDMHDFFVGLMGKRSVQPDSPTDVNQENVPSFGILKYPPRAE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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