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Report for CCDS8970.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8970.1 Public Homo sapiens 12 GNS 24 110 108 CCDS HistoryNCBI Gene:2799Re-query CCDS DB by CCDS ID:8970.1Re-query CCDS DB by GeneID:2799See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8970.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258145.8 ENSP00000258145.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258145.8Link to Ensembl Protein Viewer:ENSP00000258145.3Re-query CCDS DB by Nucleotide ID:ENST00000258145Re-query CCDS DB by Protein ID:ENSP00000258145
Original member Current member NCBI NM_002076.4 NP_002067.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002076.4Link to Protein Sequence:NP_002067.1Re-query CCDS DB by Nucleotide ID:NM_002076Re-query CCDS DB by Protein ID:NP_002067Link to BLAST:NP_002067.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002067.1 552 P15586-1 552 100% 0 0

Chromosomal Locations for CCDS 8970.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 64716741 64716819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64720022 64720182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64721595 64721705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64723006 64723113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64728956 64729057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64737004 64737107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64739381 64739499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64740606 64740688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64743141 64743308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64744809 64744907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64745659 64745724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64747712 64747918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64752698 64752757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64759085 64759276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1659 nt):
ATGCGGCTCCTGCCTCTAGCCCCAGGTCGGCTCCGGCGGGGCAGCCCCCGCCACCTGCCCTCCTGCAGCC
CAGCGCTGCTACTGCTGGTGCTGGGCGGCTGCCTGGGGGTCTTCGGGGTGGCTGCGGGAACCCGGAGGCC
CAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGACACCGCTAAAGAAAACC
AAAGCTCTCATCGGAGAGATGGGGATGACTTTTTCCAGTGCTTATGTGCCAAGTGCTCTCTGCTGCCCCA
GCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATCATCACGTTGTGAACAACACTCTGGAGGGGAA
CTGCAGTAGTAAGTCCTGGCAGAAGATCCAAGAACCAAATACTTTCCCAGCAATTCTCAGATCAATGTGT
GGTTATCAGACCTTTTTTGCAGGGAAATATTTAAATGAGTACGGAGCCCCAGATGCAGGTGGACTAGAAC
ACGTTCCTCTGGGTTGGAGTTACTGGTATGCCTTGGAAAAGAATTCTAAGTATTATAATTACACCCTGTC
TATCAATGGGAAGGCACGGAAGCATGGTGAAAACTATAGTGTGGACTACCTGACAGATGTTTTGGCTAAT
GTCTCCTTGGACTTTCTGGACTACAAGTCCAACTTTGAGCCCTTCTTCATGATGATCGCCACTCCAGCGC
CTCATTCGCCTTGGACAGCTGCACCTCAGTACCAGAAGGCTTTCCAGAATGTCTTTGCACCAAGAAACAA
GAACTTCAACATCCATGGAACGAACAAGCACTGGTTAATTAGGCAAGCCAAGACTCCAATGACTAATTCT
TCAATACAGTTTTTAGATAATGCATTTAGGAAAAGGTGGCAAACTCTCCTCTCAGTTGATGACCTTGTGG
AGAAACTGGTCAAGAGGCTGGAGTTCACTGGGGAGCTCAACAACACTTACATCTTCTATACCTCAGACAA
TGGCTATCACACAGGACAGTTTTCCTTGCCAATAGACAAGAGACAGCTGTATGAGTTTGATATCAAAGTT
CCACTGTTGGTTCGAGGACCTGGGATCAAACCAAATCAGACAAGCAAGATGCTGGTTGCCAACATTGACT
TGGGTCCTACTATTTTGGACATTGCTGGCTACGACCTAAATAAGACACAGATGGATGGGATGTCCTTATT
GCCCATTTTGAGAGGTGCCAGTAACTTGACCTGGCGATCAGATGTCCTGGTGGAATACCAAGGAGAAGGC
CGTAACGTCACTGACCCAACATGCCCTTCCCTGAGTCCTGGCGTATCTCAATGCTTCCCAGACTGTGTAT
GTGAAGATGCTTATAACAATACCTATGCCTGTGTGAGGACAATGTCAGCATTGTGGAATTTGCAGTATTG
CGAGTTTGATGACCAGGAGGTGTTTGTAGAAGTCTATAATCTGACTGCAGACCCAGACCAGATCACTAAC
ATTGCTAAAACCATAGACCCAGAGCTTTTAGGAAAGATGAACTATCGGTTAATGATGTTACAGTCCTGTT
CTGGGCCAACCTGTCGCACTCCAGGGGTTTTTGACCCCGGATACAGGTTTGACCCCCGTCTCATGTTCAG
CAATCGCGGCAGTGTCAGGACTCGAAGATTTTCCAAACATCTTCTGTAG

Translation (552 aa):
MRLLPLAPGRLRRGSPRHLPSCSPALLLLVLGGCLGVFGVAAGTRRPNVVLLLTDDQDEVLGGMTPLKKT
KALIGEMGMTFSSAYVPSALCCPSRASILTGKYPHNHHVVNNTLEGNCSSKSWQKIQEPNTFPAILRSMC
GYQTFFAGKYLNEYGAPDAGGLEHVPLGWSYWYALEKNSKYYNYTLSINGKARKHGENYSVDYLTDVLAN
VSLDFLDYKSNFEPFFMMIATPAPHSPWTAAPQYQKAFQNVFAPRNKNFNIHGTNKHWLIRQAKTPMTNS
SIQFLDNAFRKRWQTLLSVDDLVEKLVKRLEFTGELNNTYIFYTSDNGYHTGQFSLPIDKRQLYEFDIKV
PLLVRGPGIKPNQTSKMLVANIDLGPTILDIAGYDLNKTQMDGMSLLPILRGASNLTWRSDVLVEYQGEG
RNVTDPTCPSLSPGVSQCFPDCVCEDAYNNTYACVRTMSALWNLQYCEFDDQEVFVEVYNLTADPDQITN
IAKTIDPELLGKMNYRLMMLQSCSGPTCRTPGVFDPGYRFDPRLMFSNRGSVRTRRFSKHLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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