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Report for CCDS90837.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90837.1 Public Homo sapiens 1 HES4 24 110 108 CCDS HistoryNCBI Gene:57801Re-query CCDS DB by CCDS ID:90837.1Re-query CCDS DB by GeneID:57801See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90837.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000484667.2 ENSP00000425085.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000484667.2Link to Ensembl Protein Viewer:ENSP00000425085.1Re-query CCDS DB by Nucleotide ID:ENST00000484667Re-query CCDS DB by Protein ID:ENSP00000425085
Current member NCBI NM_001410700.1 NP_001397629.1 Accepted alive Link to Nucleotide Sequence:NM_001410700.1Link to Protein Sequence:NP_001397629.1Re-query CCDS DB by Nucleotide ID:NM_001410700Re-query CCDS DB by Protein ID:NP_001397629Link to BLAST:NP_001397629.1

Chromosomal Locations for CCDS 90837.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 999059 999432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 999526 999613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 999866 999973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGGCCGCAGACACGCCGGGGAAACCGAGCGCCTCGCCGATGGCAGGAGCGCCGGCCAGCGCCAGCCGGA
CCCCAGACAAGCCCCGGAGCGCGGCCGAGCACCGCAAGAGCTCCCGCCACTCGAAGCTGGAGAAGGCGGA
CATCCTGGAGATGACCGTGAGACACCTGCGGAGCCTGCGTCGCGTGCAGGTGACGGCCGCGCTCAGCGCC
GACCCCGCCGTTCTGGGCAAGTACCGCGCCGGCTTCCACGAGTGTCTGGCGGAGGTGAACCGCTTCCTGG
CCGGCTGCGAGGGCGTCCCGGCCGACGTGCGCTCCCGCCTGCTGGGCCACCTGGCAGCCTGCCTGCGCCA
GCTGGGACCCTCCCGCCGCCCGGCCTCGCTGTCCCCGGCTGCCCCCGCAGAGGCCCCAGCGCCCGAGGTC
TACGCGGGCCGCCCGCTGCTGCCATCGCTCGGCGGCCCCTTCCCTCTGCTCGCGCCGCCGCTGCTGCCGG
GTCTGACCCGGGCGCTGCCCGCCGCCCCCAGGGCGGGGCCGCAGGGCCCGGGTGGGCCCTGGAGGCCGTG
GCTGCGCTGA

Translation (189 aa):
MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRKSSRHSKLEKADILEMTVRHLRSLRRVQVTAALSA
DPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSRRPASLSPAAPAEAPAPEV
YAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPGGPWRPWLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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