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Report for CCDS90862.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90862.1 Public Homo sapiens 1 C1orf167 24 110 108 CCDS HistoryNCBI Gene:284498Re-query CCDS DB by CCDS ID:90862.1Re-query CCDS DB by GeneID:284498See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 90862.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000688073.1 ENSP00000510540.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000688073.1Link to Ensembl Protein Viewer:ENSP00000510540.1Re-query CCDS DB by Nucleotide ID:ENST00000688073Re-query CCDS DB by Protein ID:ENSP00000510540
Original member Current member NCBI NM_001010881.2 NP_001010881.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010881.2Link to Protein Sequence:NP_001010881.1Re-query CCDS DB by Nucleotide ID:NM_001010881Re-query CCDS DB by Protein ID:NP_001010881Link to BLAST:NP_001010881.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010881.1 1449 Q5SNV9-1 1449 100% 0 0

Chromosomal Locations for CCDS 90862.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 11764401 11764470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11765857 11767085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11767221 11767264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11768077 11768275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11768973 11769127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11771524 11771636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11772082 11772259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11775435 11775610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11776464 11776638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11778660 11778816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11778926 11779080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11779802 11780010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11782189 11782333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11784174 11784593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11785148 11785289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11787388 11787493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11787873 11788047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11788149 11788378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11788652 11788746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11789270 11789446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4350 nt):
ATGGAGCTAAGGTCTGATGCCAGCCACAAGGAGAATGTGTCCCCAAAGCCTGCAGCGCTCCCGAAGCCAG
AGCAACGAAGATTCCGGAGGAGCCTGGGCATCGGCCTGAGTGGTAGACATGACCAGTGGGTGCCCGGGTG
CCAGGTGGAGAGGGGAGGGCCTGCTGCCACACCCTCCCCAGGGGCAGTGCTAGACCAGGAGCCCTGCCGA
GTCCAGACCAACCTGGCCAGCCCTGGTCCCCGCCTGGGCCTAGCTCTGAAGGACACGACTGGCCAACTGG
TCAATTCAAGCTTCTGGCAACAGAGCAACCTGCAGTCCCTGGCCAGGAGGCGCCAAGGGAAGGCCCGAGA
GTTTGCCATCCAGCAGAGCAACCTGAGCATCAACGAGACCAGCAGCCCCCACCTCTGCCCAGAGCCTGGG
GGAAGCTCTGGGCCCCACAAGCTTCCCTGGGGTCCTCTCCTATCCCAAGAGCCACTGGCTCGCCCATCTT
CCTGCCTGAGGCAGTCCGGGCTGCCGGCCCCAGGCACCCCTAGCGGGGACTTCAGGCCCACTGAAGCCTT
TGCCCCTCTCGATGGGCATACACAGCCAGGCCTCAGATCCTGGGGTGGTCTGGGGAGCTGGAGGTCCAGG
CTGGTGGGGGAACCTCTCACCCTGGAGGACCTGGCTGTCCCCAGTCAGAACCAGACTCAGGCCCCATCCC
GTGCTGCCGTCCACCAGCTGCTGGCTTCTGTACATTGCCTGGCGCAGGAGGCAGCCCGACTCAGGTGCCA
GGCTCCCCAGGAACCCCCCGGTGCTGTGCAGCAGGACCTCTGGACCGGCGGCGGCCAGCCATTCTCCGCC
CACCCCCAGCCCAGCCAGCCTGTCCTTGCTTCCTCGGATGGGAGGAGGAGACGCCTTCGAGGCCACAGGG
AAACTGCGGCTTTCTTGGAGACCCCGGCTAGTCTCTCAGACTCTTGGGCACAAAGCAAGCTAATGTCACC
TGAGACCACTTTGGGGACACGGACCAAGGATTCCCTTAATCCTGAGCAGGGGCTCCCTCCTGCCCACCCC
CTAGGGTCAGGGGACAGCTGCTCCCCCTGGTCTCAAGATGGCAGGGCACAGAGGGGTGACCCCAGTCTCC
CTCGAGGGGTGGGAAGCAGGGGGACCGACCCCTGTTCCTCAGCCTTCTCCAACACAGCCTGGGGAGTCTC
ACCCAAGCAGAAAGGAGAGGAGGGGGCCCCGAGGGAGCGGGTCCACAGGGAGGAGGAGAGGACAGCTTTC
CATCTGTCAGACACAGTCCCAGCGAGCAGTGCGTCGAAGAACAAGGCACAAAACATCACAGCCCCAGAGT
CTGAGGCAATCTGCTGGCAGCTGTTGTCCAGATGTTTTCGATCCTGGAGGCACTTGGTGAAGAGGCAGCG
GGAGCCAGCGGCGGCGGCAGTGGCACTGGGCCGCTGGCAGCTGTTGCGAAAGTGCCTTCAGGCCTTGTGG
CTCCGGGAGGCTCAGCTGGAGGCAGCATGGGGGCAGTACACAAAGGTTCTGCTGGTCCGGAGCTTCCGAG
AGTGGAGAAACCTGGCTTTACAGCAGAAACAAGTACAGCCCCACATGCAGGCTGGGCCAGGGTCCCCGCC
CTCCAGGAGAGCCCAGGGCAAAGGCCTCTCCTTGGGAAGAAGCACAGTGGTGGACCCCGCCCAGAGAAGC
AGGCTGGAACACACCAGTCCAGGAAGTCTGAGGGAGGAGGAGATTGCTCAGCGGCTTCTGTCACATCCTA
GGCAGAGAACAGACAGCAGACACGAGAGAGTCCAGATCCTGCAGGCCCTGCAACTGGCTGTGTTCTTCCT
GTGGTGCCAACAGAAGAAACGGGCCAGACAGGAGAGGGAGACTCTGCGGAAGGCCACCAGGGCCACACAG
AGGACAGGGAGCTTCCCCCAGGCCTGGCACTCTACTGCTGCAGGTGTAGCCTGGGTGGCCCCACTGAGCC
CCCAGCACCAGAGAGCTTGGCTGTGCAGGTGCTTCGGGGCGTGGCAGCAGTTCGTGCAAAGAGGGTCCCG
GTACCGAGACCACCTGGCTGACCGCCGGACGGGGACCCTGAGGAAATGCCTGGAACAGTGGGTGCGGATG
AAGCAGCTCCGGGAATCAGATGGGGCAAAGGTGACCCAGCTGTCCCTCTGCCGGCAGAAAGCAGGACGTG
AGGCTGTCTACACCGCAGGCCCTGGAGCCTGTGGCCTGGGTGCAGTGGGCCAGGCCCAGGGGCAGCAGGA
GCAAGGCCGGGGCTCCCTGCAGGATGCCTGCTGGACACTGGCCCTCTGCTGGGCGCTGCTGCTGTGGAAG
ATGCGGCTTTTCCAGCGCCAGTGGGCCAACTCCTTCTTCCAGGGCCTGCAGCAGCGGATGCTGCAGCGCA
GCCTGAGATGGTGGCACTTGAGGGCACTGGGCCCAGATGCCACATCAAGCTGCACCAAGACCCCCTCGGC
TCTGGAGCCACTGAGCAGCAGCACACTCCAAGACTCTCTGGAGAAGGTTCCCAGGGCCCCCACCCTCCCG
GACACTCTCCAGGGGAGCCTTCTGTGGGCAGCTGGGCAGCGGCAGCAGGGGCAGTGCCTTCTGCTCTGGC
AGGCACGGGCCCAGCAGTTCCAGGGCACAGCCAGGTGGTACCAGCATACCCGCCAGAGGCGCATCTTCCT
CAGCTGGAGCCGCTGGGCAACAGCCCAATGGGCCTGGAGAGAGCTGGCTTCCCACCGGGCCTGGGATCGG
ACCTGCAGGGCTGTGCTGGGCCTGTGGCGTCAGCGGCTGCTGCAGTCACGGCTGGTGGAGTGGTGGGCCC
AGGAGCGGGGCTGGCGGCTGGCACGAGATGCCCTATGCCACTGGCACTCCTGTTGGCAGGGGCAGCAGTT
CCTGCATGAAAAGTGCCAGACATGGGTGCAGGTCCACCTCCAGGGCCTGCAGAAGGTGGTGTTCCGGAGC
TGGCAGCAGGCAGCAGCTCATCAGAGATGCACAGTGACCCGGCCAGAGCAGCTGCTACTGCAGAGCTACT
TCCAGGCCTGGTGTGAGGTTGTAAGAGACACGGGGGTGCTCCGGGCCCAGCATCAAGCCTTTCAGGATGG
CCTGAGGAGAAGAGCACTGGGGGCCGTGTTTGCCACATGGCGGGAAGCCCAGGAAGTGGCAGCCGGGGCA
CAGGAGCAGCGTGTGGCCCAGGCCTCCCTTGCCCGCTGGAGAAGCTGCGGGCAGCAAGGCCAGGAAGATG
GGCAGCAGAAGAAGGCCCGGGCCCCACAGGCCTTCCCAGCATGGCCAGTGGCCCCGGGCATGCACCATGA
GGCCCAGCAGCAGGCAGGAGAGAGCGCTGGGGCCCAGGCAGCCCAGTGCTGGACTTGGTGCTGGGCTCTG
TGGGTGCATGAGTCCTGTCGGGGCCAGGTCAGCCGAGCCCATGCTTCCTGGAAGCCGCGAGCCTGGGTCC
TAGAGGCCTCGGTGCAGTCGGCGGTGCGCGGCGGTGTCCAGCGAGCCATCCTCACCCAGCTCCGGCCGGC
TGAGCTCAGGCGCTTCCTGCGGACAGTGCAGCTCAGGGTGCGGCTGGGACTGCCAGGGGCCGGCAAGACC
CGCAGCTGCTGGACACAGGCCACAGAGCTGGTGCCTCCCGCGCCATCACTGCAGTGCAGCCTGGGTGGAC
GGAGGAAGCCAAGGGGAACGGCCTGGGCTCAGAGGTGCAGGGAACATTCCCTCTGCCCTGCCTTCCAGCT
CTGGCCACAGTGGCCTGGACAGAGTAGCTGGGTCCCAGGCCTGCCCCTGTGGACGAGGGACCAGGGACCA
AGAGCGCACTCCAGCCCTGAGCCCAGAGCCTGCAAAGCCCAAAGCAAGGCCCATAAACGGAGGCTACGTG
CTCGTTCCTGCAGGATCCTGGAAAAGCAGGCCCAGGCCCATGGCTCTGCCCTCCTTCTGGCCCTGAAGGG
TCACGATGCTCTTGGCCATCAGGAGGAAGTACCTGCAGCGCCGGTGCCTCGAGGCACTGCTTCACGGGCT
GCGGGGTTCCCAGCAGGCCAGGTGCCTGGCAGTGGCATGGCAGCACTGGGTGGATGCCCAAGGGGCAGAG
CAGCTGGTGCGGACCCTGCTCAGGGAGTGGCACCTGAGATGGGCCTGGCAGACGTGGTGGCAGCGGATCC
TGCGACTGCGAGTGGCTCAGCAGTTACAGCAGCAGGAAGATGGGCCTTTAAGAAGTGGCACCAACGCCTG
GCAGCCAGGAGCCCAAGGAGAGGAGCTGCCAGTAGCCCAAGACCCTGGAGCAAGCCAGGCCCCAAGGGCC
CCGAGAGTGGACAGGAAGCCGCCAGAGCACCGCGGGGTTGGGGGCTTGGGGCAGAGCATGGGGCCCAGCT
GCAGCTGTGA

Translation (1449 aa):
MELRSDASHKENVSPKPAALPKPEQRRFRRSLGIGLSGRHDQWVPGCQVERGGPAATPSPGAVLDQEPCR
VQTNLASPGPRLGLALKDTTGQLVNSSFWQQSNLQSLARRRQGKAREFAIQQSNLSINETSSPHLCPEPG
GSSGPHKLPWGPLLSQEPLARPSSCLRQSGLPAPGTPSGDFRPTEAFAPLDGHTQPGLRSWGGLGSWRSR
LVGEPLTLEDLAVPSQNQTQAPSRAAVHQLLASVHCLAQEAARLRCQAPQEPPGAVQQDLWTGGGQPFSA
HPQPSQPVLASSDGRRRRLRGHRETAAFLETPASLSDSWAQSKLMSPETTLGTRTKDSLNPEQGLPPAHP
LGSGDSCSPWSQDGRAQRGDPSLPRGVGSRGTDPCSSAFSNTAWGVSPKQKGEEGAPRERVHREEERTAF
HLSDTVPASSASKNKAQNITAPESEAICWQLLSRCFRSWRHLVKRQREPAAAAVALGRWQLLRKCLQALW
LREAQLEAAWGQYTKVLLVRSFREWRNLALQQKQVQPHMQAGPGSPPSRRAQGKGLSLGRSTVVDPAQRS
RLEHTSPGSLREEEIAQRLLSHPRQRTDSRHERVQILQALQLAVFFLWCQQKKRARQERETLRKATRATQ
RTGSFPQAWHSTAAGVAWVAPLSPQHQRAWLCRCFGAWQQFVQRGSRYRDHLADRRTGTLRKCLEQWVRM
KQLRESDGAKVTQLSLCRQKAGREAVYTAGPGACGLGAVGQAQGQQEQGRGSLQDACWTLALCWALLLWK
MRLFQRQWANSFFQGLQQRMLQRSLRWWHLRALGPDATSSCTKTPSALEPLSSSTLQDSLEKVPRAPTLP
DTLQGSLLWAAGQRQQGQCLLLWQARAQQFQGTARWYQHTRQRRIFLSWSRWATAQWAWRELASHRAWDR
TCRAVLGLWRQRLLQSRLVEWWAQERGWRLARDALCHWHSCWQGQQFLHEKCQTWVQVHLQGLQKVVFRS
WQQAAAHQRCTVTRPEQLLLQSYFQAWCEVVRDTGVLRAQHQAFQDGLRRRALGAVFATWREAQEVAAGA
QEQRVAQASLARWRSCGQQGQEDGQQKKARAPQAFPAWPVAPGMHHEAQQQAGESAGAQAAQCWTWCWAL
WVHESCRGQVSRAHASWKPRAWVLEASVQSAVRGGVQRAILTQLRPAELRRFLRTVQLRVRLGLPGAGKT
RSCWTQATELVPPAPSLQCSLGGRRKPRGTAWAQRCREHSLCPAFQLWPQWPGQSSWVPGLPLWTRDQGP
RAHSSPEPRACKAQSKAHKRRLRARSCRILEKQAQAHGSALLLALKGHDALGHQEEVPAAPVPRGTASRA
AGFPAGQVPGSGMAALGGCPRGRAAGADPAQGVAPEMGLADVVAADPATASGSAVTAAGRWAFKKWHQRL
AARSPRRGAASSPRPWSKPGPKGPESGQEAARAPRGWGLGAEHGAQLQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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