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Report for CCDS90887.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90887.1 Public Homo sapiens 1 MAN1C1 24 110 108 CCDS HistoryNCBI Gene:57134Re-query CCDS DB by CCDS ID:90887.1Re-query CCDS DB by GeneID:57134See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90887.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374329.1 ENSP00000363449.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374329.1Link to Ensembl Protein Viewer:ENSP00000363449.1Re-query CCDS DB by Nucleotide ID:ENST00000374329Re-query CCDS DB by Protein ID:ENSP00000363449
Original member Current member NCBI NM_001385185.1 NP_001372114.1 Accepted alive Link to Nucleotide Sequence:NM_001385185.1Link to Protein Sequence:NP_001372114.1Re-query CCDS DB by Nucleotide ID:NM_001385185Re-query CCDS DB by Protein ID:NP_001372114Link to BLAST:NP_001372114.1

Chromosomal Locations for CCDS 90887.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 25746718 25746783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25749255 25749335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25753484 25753578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25758592 25758709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25763874 25763967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25771657 25771772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25778105 25778324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25780940 25781112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25782585 25782700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25783663 25783789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1206 nt):
ATGGAGCTGAAGGAGGAGTTCCAGGAGGCCAAGGCCTGGGTGGGAGAGAGCTTCCACCTGAACGTGAGCG
GAGAAGCATCCTTGTTTGAGGTGAACATCCGCTACATCGGGGGACTCCTCTCAGCCTTCTACCTGACAGG
AGAAGAGGTGTTCCGAATAAAGGCCATCAGGCTGGGAGAGAAGCTCCTGCCGGCGTTCAACACCCCCACG
GGAATCCCAAAGGGCGTGGTGAGCTTCAAAAGTGGGAACTGGGGCTGGGCCACAGCCGGCAGCAGCAGCA
TCTTGGCGGAGTTTGGATCCCTGCACTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTT
CGCTGAAAAGGTCAGGAACATCCGCAAGGTCCTCAGGAAGATCGAAAAGCCCTTTGGCCTCTACCCCAAC
TTCCTCAGCCCAGTGAGTGGGAACTGGGTGCAACACCATGTCTCAGTTGGAGGACTCGGGGACAGTTTTT
ATGAATATTTGATCAAATCCTGGTTGATGTCGGGCAAGACAGATATGGAGGCTAAAAATATGTACTACGA
AGCCTTGGAGGCGATAGAGACCTACTTGCTGAATGTCTCTCCCGGGGGGCTGACCTACATTGCCGAGTGG
CGAGGGGGGATTCTGGACCACAAGATGGGGCACCTGGCCTGTTTCTCCGGGGGCATGATCGCCCTTGGCG
CCGAGGATGCCAAGGAAGAAAAGAGGGCCCACTACCGAGAGCTCGCAGCCCAGATCACCAAGACGTGTCA
CGAGTCATACGCCCGCTCAGACACCAAACTTGGGCCTGAGGCCTTCTGGTTTAACTCCGGCAGAGAGGCC
GTGGCCACCCAGCTGAGCGAGAGCTACTACATCCTCCGGCCAGAGGTGGTGGAGAGCTACATGTACCTGT
GGCGACAGACCCACAACCCCATCTACAGGGAGTGGGGCTGGGAGGTGGTGCTGGCCTTGGAGAAATACTG
TCGGACAGAAGCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAGCACCCCCAACCACGACAACAAGCAG
CAGAGCTTCTTTCTAGCGGAGACACTAAAGTATCTCTATCTTCTGTTCTCTGAAGATGACTTGCTCTCCC
TGGAAGACTGGGTGTTCAACACCGAGGCCCACCCACTCCCGGTGAACCACTCAGACAGCTCCGGCAGAGC
CTGGGGCAGACACTGA

Translation (401 aa):
MELKEEFQEAKAWVGESFHLNVSGEASLFEVNIRYIGGLLSAFYLTGEEVFRIKAIRLGEKLLPAFNTPT
GIPKGVVSFKSGNWGWATAGSSSILAEFGSLHLEFLHLTELSGNQVFAEKVRNIRKVLRKIEKPFGLYPN
FLSPVSGNWVQHHVSVGGLGDSFYEYLIKSWLMSGKTDMEAKNMYYEALEAIETYLLNVSPGGLTYIAEW
RGGILDHKMGHLACFSGGMIALGAEDAKEEKRAHYRELAAQITKTCHESYARSDTKLGPEAFWFNSGREA
VATQLSESYYILRPEVVESYMYLWRQTHNPIYREWGWEVVLALEKYCRTEAGFSGIQDVYSSTPNHDNKQ
QSFFLAETLKYLYLLFSEDDLLSLEDWVFNTEAHPLPVNHSDSSGRAWGRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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