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Report for CCDS90911.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
90911.1 |
Public |
Homo sapiens |
1 |
PHC2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:1912](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:90911.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:1912](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 90911.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000683057.1 |
ENSP00000507877.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000683057.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000507877.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000683057](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000507877](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001385109.1 |
NP_001372038.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001385109.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001372038.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001385109](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001372038](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001372038.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001385119.1 |
NP_001372048.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001385119.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001372048.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001385119](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001372048](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001372048.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001385120.1 |
NP_001372049.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001385120.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001372049.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001385120](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001372049](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001372049.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 90911.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2580 nt): ATGGAGAATGAGCTGCCAGTCCCACATACATCTAGCAGTGCCTGTGCCACCAGCAGTACCAGCGGGGCCA GTAGCAGCAGTGGCTGCAACAACAGCAGCAGTGGTGGAAGTGGCCGCCCCACCGGGCCCCAGATTTCTGT GTACAGTGGTATTCCAGACCGGCAGACCGTGCAGGTGATCCAGCAGGCCCTGCACAGACAGCCCAGCACG GCCGCTCAGTACCTGCAGCAGATGTACGCCGCCCAGCAGCAGCACCTCATGCTGCAGACCGCGGCGCTCC AGCAGCAGCACCTCAGCAGCGCCCAGCTCCAGAGCCTGGCAGCCGTACAGCAGGCAAGCCTGGTATCCAA TAGACAAGGAAGCACTTCAGGCAGCAATGTGTCTGCGCAGGCCCCGGCCCAGTCATCTTCGATCAACCTG GCAGCCTCCCCAGCAGCAGCCCAGCTCCTCAACCGGGCCCAGAGTGTGAACTCTGCAGCAGCCTCAGGCA TCGCTCAGCAGGCTGTGCTCTTGGGCAACACGTCTTCCCCAGCCCTGACTGCAAGCCAAGCACAGATGTA TCTGAGGGCACAGATGCTCATCTTCACGCCCACGGCCACCGTCGCTACTGTGCAGCCTGAGCTCGGCACT GGCTCCCCCGCCCGGCCCCCCACCCCCGCCCAGGTACAGAACTTGACCCTCCGAACACAGCAGACACCAG CGGCAGCAGCCTCGGGCCCCACCCCCACTCAGCCTGTCCTGCCCAGCTTGGCCCTGAAACCCACGCCGGG CGGTAGCCAGCCTCTGCCTACCCCAGCACAGAGCAGAAATACTGCTCAGGCTTCCCCTGCAGGTGCCAAG CCTGGCATAGCTGACAGTGTGATGGAGCCACACAAGAAAGGAGATGGCAACAGCAGTGTGCCAGGGAGCA TGGAAGGCCGGGCTGGGCTCAGCCGGACGGTTCCTGCTGTGGCTGCCCACCCCCTCATTGCACCAGCCTA TGCTCAGCTGCAGCCACACCAGCTCCTCCCACAGCCATCCTCAAAGCACCTGCAGCCCCAATTTGTGATC CAGCAGCAGCCACAGCCACAACAGCAGCAGCCGCCGCCCCAGCAGTCACGGCCTGTGCTCCAAGCTGAGC CCCACCCCCAGCTCGCCTCAGTCTCTCCAAGCGTGGCCCTCCAGCCCAGCTCAGAGGCCCATGCCATGCC ACTAGGCCCGGTTACACCCGCCCTGCCACTCCAGTGTCCCACTGCCAACCTGCACAAGCCTGGCGGCAGT CAGCAGTGTCACCCTCCCACACCTGATACTGGGCCTCAGAATGGACATCCCGAGGGCGTGCCCCACACCC CTCAACGCAGGTTCCAGCACACTTCAGCTGTCATCTTACAACTGCAGCCTGCTTCACCAGTGCCCCAGCA GTGTGTCCCTGATGACTGGAAAGAAGTGGCACCAGGGGAGAAAAGTGTGCCTGAGACGCGGTCTGGCCCA TCACCACATCAGCAGGCTATTGTCACTGCCATGCCTGGTGGCCTGCCTGTACCCACGAGCCCTAACATCC AGCCGTCCCCAGCTCACGAGACAGGGCAGGGCATTGTTCATGCACTGACCGACCTCAGCAGCCCCGGCAT GACCTCAGGGAACGGAAACTCTGCCTCCAGCATCGCCGGCACTGCCCCCCAGAATGGTGAGAATAAACCA CCACAGGCCATTGTGAAACCCCAAATCCTGACGCATGTTATCGAAGGGTTTGTGATCCAGGAGGGGGCGG AGCCTTTCCCGGTGGGACGCTCGTCCCTGCTGGTGGGGAATCTCAAGAAGAAGTATGCACAGGGGTTCCT GCCTGAGAAACTTCCACAGCAGGATCACACCACCACCACTGACTCGGAGATGGAGGAGCCCTATCTGCAA GAATCCAAAGAGGAGGGTGCTCCCCTCAAACTCAAGTGTGAGCTCTGTGGCCGGGTGGACTTTGCCTATA AGTTCAAGCGTTCCAAGCGCTTCTGTTCCATGGCTTGTGCAAAGAGGTACAACGTGGGATGCACCAAACG GGTGGGACTTTTCCACTCAGACCGGAGCAAGCTGCAGAAGGCAGGAGCTGCGACCCACAACCGCCGTCGG GCCAGCAAAGCCAGTCTGCCACCACTTACCAAGGATACCAAGAAGCAGCCAACAGGCACTGTGCCCCTTT CGGTTACTGCTGCTTTGCAGCTAACACACAGCCAGGAAGACTCCAGCCGTTGCTCAGATAACTCAAGCTA TGAGGAACCCTTGTCACCCATCTCAGCCAGCTCATCTACTTCCCGCCGGCGACAAGGCCAGCGGGACCTG GAGCTCCCCGACATGCATATGCGGGACCTGGTGGGCATGGGACACCACTTCCTGCCAAGTGAGCCCACCA AGTGGAATGTAGAAGACGTCTACGAATTCATCCGCTCTCTGCCAGGCTGCCAGGAGATAGCAGAGGAATT CCGTGCCCAGGAAATCGACGGGCAAGCCCTGCTGCTGCTCAAGGAGGACCACCTGATGAGCGCCATGAAC ATCAAGCTGGGGCCCGCCCTGAAGATCTACGCCCGCATCAGCATGCTCAAGGACTCCTAG
Translation (859 aa): MENELPVPHTSSSACATSSTSGASSSSGCNNSSSGGSGRPTGPQISVYSGIPDRQTVQVIQQALHRQPST AAQYLQQMYAAQQQHLMLQTAALQQQHLSSAQLQSLAAVQQASLVSNRQGSTSGSNVSAQAPAQSSSINL AASPAAAQLLNRAQSVNSAAASGIAQQAVLLGNTSSPALTASQAQMYLRAQMLIFTPTATVATVQPELGT GSPARPPTPAQVQNLTLRTQQTPAAAASGPTPTQPVLPSLALKPTPGGSQPLPTPAQSRNTAQASPAGAK PGIADSVMEPHKKGDGNSSVPGSMEGRAGLSRTVPAVAAHPLIAPAYAQLQPHQLLPQPSSKHLQPQFVI QQQPQPQQQQPPPQQSRPVLQAEPHPQLASVSPSVALQPSSEAHAMPLGPVTPALPLQCPTANLHKPGGS QQCHPPTPDTGPQNGHPEGVPHTPQRRFQHTSAVILQLQPASPVPQQCVPDDWKEVAPGEKSVPETRSGP SPHQQAIVTAMPGGLPVPTSPNIQPSPAHETGQGIVHALTDLSSPGMTSGNGNSASSIAGTAPQNGENKP PQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVGNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQ ESKEEGAPLKLKCELCGRVDFAYKFKRSKRFCSMACAKRYNVGCTKRVGLFHSDRSKLQKAGAATHNRRR ASKASLPPLTKDTKKQPTGTVPLSVTAALQLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDL ELPDMHMRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMN IKLGPALKIYARISMLKDS
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