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Report for CCDS90937.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90937.1 Public Homo sapiens 1 BTBD19 24 110 108 CCDS HistoryNCBI Gene:149478Re-query CCDS DB by CCDS ID:90937.1Re-query CCDS DB by GeneID:149478See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90937.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409335.6 ENSP00000386506.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409335.6Link to Ensembl Protein Viewer:ENSP00000386506.2Re-query CCDS DB by Nucleotide ID:ENST00000409335Re-query CCDS DB by Protein ID:ENSP00000386506
Original member Current member NCBI NM_001394564.1 NP_001381493.1 Accepted alive Link to Nucleotide Sequence:NM_001394564.1Link to Protein Sequence:NP_001381493.1Re-query CCDS DB by Nucleotide ID:NM_001394564Re-query CCDS DB by Protein ID:NP_001381493Link to BLAST:NP_001381493.1

Chromosomal Locations for CCDS 90937.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 44808821 44808906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44810213 44810426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44812996 44813064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44813138 44813269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44813374 44813499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44813638 44813772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (762 nt):
ATGGAGCCCTTGGGACTGGTCGTGCATGGGAAAGCTGAACCTTTTTCCGCAGCACTCCGAAGCCTTGTCA
ACAACCCGCGATACAGTGATGTTTGCTTCGTGGTTGGTCAAGAACGGCAGGAGGTATTTGCCCATCGGTG
CTTGTTGGCCTGTAGATGCAACTTCTTCCAGCGACTTCTGGGCACAGAGCCAGGCCCCGGGGTGCCCAGT
CCTGTGGTGCTAAGCACTGTGCCAACTGAGGCCTTCCTGGCAGTGCTGGAGTTCCTATATACCAACAGTG
TCAAGCTGTACCGCCACTCTGTGGCCGTAACCTTTGGCCTGGGGCAGCTGCAGGAGCGCTGCGTGGCTTT
CATAGAGGCCCACAGCCAGGAGGCCCTCCGGACCCGAGGCTTCCTGGAGCTGTCGGCGGCCGCGCTGCTG
CCCCTGCTCCGCAGCGACAAGCTCTGCGTGGACGAGGCTGAACTGGTCCGCGCGGCCCGAAGCTGGGCGC
GCGTGGGCGCGGCGGTGCTGGAGCGGCCGGTGGCTGAGGTGGCGGCCCCGGTGGTGAAAGAGCTGAGACT
AGCCTTGCTGGCCCCGGCGGAGCTGAGCGCCCTGGAAGAGCAGAACCGGCAGGAACCACTCATCCCGGTG
GAGCAGATTGTGGAGGCGTGGAAATGCCATGCCCTGCGGAGAGGGGATGAGGCCCGGGGCGCCCCGTGTC
GCCGCCGGAGAGGCACCCTGCCCCGGGAGCATCACCGCTTTCTGGACCTGTCCTTCAAATGA

Translation (253 aa):
MEPLGLVVHGKAEPFSAALRSLVNNPRYSDVCFVVGQERQEVFAHRCLLACRCNFFQRLLGTEPGPGVPS
PVVLSTVPTEAFLAVLEFLYTNSVKLYRHSVAVTFGLGQLQERCVAFIEAHSQEALRTRGFLELSAAALL
PLLRSDKLCVDEAELVRAARSWARVGAAVLERPVAEVAAPVVKELRLALLAPAELSALEEQNRQEPLIPV
EQIVEAWKCHALRRGDEARGAPCRRRRGTLPREHHRFLDLSFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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