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Report for CCDS91013.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91013.1 Public Homo sapiens 1 CLCC1 24 110 108 CCDS HistoryNCBI Gene:23155Re-query CCDS DB by CCDS ID:91013.1Re-query CCDS DB by GeneID:23155See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91013.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000675247.2 ENSP00000502042.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675247.2Link to Ensembl Protein Viewer:ENSP00000502042.2Re-query CCDS DB by Nucleotide ID:ENST00000675247Re-query CCDS DB by Protein ID:ENSP00000502042
Original member Current member NCBI NM_001377469.1 NP_001364398.1 Accepted alive Link to Nucleotide Sequence:NM_001377469.1Link to Protein Sequence:NP_001364398.1Re-query CCDS DB by Nucleotide ID:NM_001377469Re-query CCDS DB by Protein ID:NP_001364398Link to BLAST:NP_001364398.1

Chromosomal Locations for CCDS 91013.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 108934670 108934942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108937077 108937418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108939636 108939782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108940045 108940142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108941405 108941498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108943475 108943615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108943836 108944057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108947611 108947718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108950309 108950437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1554 nt):
ATGCTGTGTTCTTTGCTCCTTTGTGAATGTCTGTTGCTGGTAGCTGGTTATGCTCATGATGATGACTGGA
TTGACCCCACAGACATGCTTAACTATGATGCTGCTTCAGGAACAATGAGAAAATCTCAGATTGATGAGTG
TGAAAAGAAAAAGAGGGAAGACTATGAAAGTCAAAGCAATCCTGTTTTTAGGAGATACTTAAATAAGATT
TTAATTGAAGCTGGAAAGCTTGGACTTCCTGATGAAAACAAAGGCGATATGCATTATGATGCTGAGATTA
TCCTTAAAAGAGAAACTTTGTTAGAAATACAGAAGTTTCTCAATGGAGAAGACTGGAAACCAGGTGCCTT
GGATGATGCACTAAGTGATATTTTAATTAATTTTAAGTTTCATGATTTTGAAACATGGAAGTGGCGATTC
GAAGATTCCTTTGGAGTGGATCCATATAATGTGTTAATGGTACTTCTTTGTCTGCTCTGCATCGTGGTTT
TAGTGGCTACTGAGCTGTGGACATATGTACGTTGGTACACTCAGTTGAGACGTGTTTTAATCATCAGCTT
TCTGTTCAGTTTGGGATGGAATTGGATGTATTTATATAAGCTAGCTTTTGCACAGCATCAGGCTGAAGTC
GCCAAGATGGAGCCATTAAACAATGTGTGTGCCAAAAAGATGGACTGGACTGGAAGTATCTGGGAATGGT
TTAGAAGTTCATGGACCTATAAGGATGACCCATGCCAAAAATACTATGAGCTCTTACTAGTCAACCCTAT
TTGGTTGGTCCCACCAACAAAGGCACTTGCAGTTACATTCACCACATTTGTAACGGAGCCATTGAAGCAT
ATTGGAAAAGGAACTGGGGAATTTATTAAAGCACTCATGAAGGAAATTCCAGCGCTGCTTCATCTTCCAG
TGCTGATAATTATGGCATTAGCCATCCTGAGTTTCTGCTATGGTGCTGGAAAATCAGTTCATGTGCTGAG
ACATATAGGCGGTCCTGAGAGCGAACCTCCCCAGGCACTTCGGCCACGGGATAGAAGACGGCAGGAGGAA
ATTGATTATAGACCTGATGGTGGAGCAGGTGATGCCGATTTCCATTATAGGGGCCAAATGGGCCCCACTG
AGCAAGGCCCTTATGCCAAAACGTATGAGGGTAGAAGAGAGATTTTGAGAGAGAGAGATGTTGACTTGAG
ATTTCAGACTGGCAACAAGAGCCCTGAAGTGCTCCGGGCATTTGATGTACCAGACGCAGAGGCACGAGAG
CATCCCACGGTGGTACCCAGTCATAAATCACCTGTTTTGGATACAAAGCCCAAGGAGACAGGTGGAATCC
TGGGGGAAGGCACACCGAAAGAAAGCAGTACTGAAAGCAGCCAGTCGGCCAAGCCTGTCTCTGGCCAAGA
CACATCAGGGAATACAGAAGGTTCACCCGCAGCGGAAAAGGCCCAGCTCAAGTCTGAAGCCGCAGGCAGC
CCAGACCAAGGCAGCACATACAGCCCCGCAAGAGGTGTGGCTGGACCACGTGGACAGGATCCGGTCAGCA
GCCCCTGTGGCTAG

Translation (517 aa):
MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQIDECEKKKREDYESQSNPVFRRYLNKI
LIEAGKLGLPDENKGDMHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRF
EDSFGVDPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQHQAEV
AKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKALAVTFTTFVTEPLKH
IGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVLRHIGGPESEPPQALRPRDRRRQEE
IDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRREILRERDVDLRFQTGNKSPEVLRAFDVPDAEARE
HPTVVPSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGS
PDQGSTYSPARGVAGPRGQDPVSSPCG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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