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Report for CCDS91113.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91113.1 Public Homo sapiens 1 RABGAP1L 24 110 108 CCDS HistoryNCBI Gene:9910Re-query CCDS DB by CCDS ID:91113.1Re-query CCDS DB by GeneID:9910See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91113.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000347255.6 ENSP00000281844.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000347255.6Link to Ensembl Protein Viewer:ENSP00000281844.5Re-query CCDS DB by Nucleotide ID:ENST00000347255Re-query CCDS DB by Protein ID:ENSP00000281844
Original member Current member NCBI NM_001366452.1 NP_001353381.1 Accepted alive Link to Nucleotide Sequence:NM_001366452.1Link to Protein Sequence:NP_001353381.1Re-query CCDS DB by Nucleotide ID:NM_001366452Re-query CCDS DB by Protein ID:NP_001353381Link to BLAST:NP_001353381.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353381.1 378 Q5R372-5 378 100% 0 0

Chromosomal Locations for CCDS 91113.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 174701117 174701122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174702113 174702256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174752313 174752354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174811832 174811960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174957457 174957549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174969277 174969387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174976078 174976182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174978807 174978890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174982834 174982905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174988641 174988838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174989849 174990001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1137 nt):
ATGAAGGAACAGCTACCGGACCTGCATAGCCATTTTTCTGATCTGAACCTGGAAGCTCATATGTATGCAT
CCCAGTGGTTTCTCACTCTTTTTACTGCCAAGTTCCCACTCTGCATGGTGTTCCACATCATTGACTTACT
GCTTTGTGAGGGTTTGAACATAATCTTTCATGTAGCTTTGGCTCTCCTAAAGACCTCAAAGGAAGACCTT
CTGCAGGCTGATTTTGAAGGTGCTTTAAAGTTCTTTAGAGTTCAGCTTCCAAAGAGATACAGGGCAGAGG
AAAATGCAAGAAGACTGATGGAGCAGGCTTGCAATATTAAAGTACCAACCAAGAAGCTGAAGAAATATGA
GAAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATGGATAGATACAAGAGGGAG
AACCGAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAGAGAATGATGACCTTGCCCATGAACTAGTAA
CAAGCAAAATTGCTCTACGGAATGACTTGGATCAGGCAGAAGACAAGGCAGATGTGTTGAATAAAGAGCT
CCTTTTGACCAAACAGAGGCTGGTGGAGACTGAAGAGGAGAAGAGGAAGCAAGAGGAAGAGACTGCCCAG
CTAAAAGAAGTCTTCAGGAAACAGCTAGAGAAGGCAGAATATGAAATAAAGAAGACTACAGCTATCATTG
CTGAGTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGA
GCTGGAAGTGGTAAAGGGTAAGATGATGGCATGCAAACACTGCAGTGACATTTTCAGCAAGGAGGGTGCT
TTGAAACTAGCAGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGATGATGAGAAGGACTCACTTAAGA
AGCAGCTGAGAGAGATGGAACTGGAACTGGCACAAACCAAACTGCAGTTGGTGGAGGCCAAGTGTAAAAT
TCAGGAACTTGAACATCAGAGAGGAGCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGC
AAAACCCTGAACTCTATCAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCAC
CCAAGGAGAGCACATAG

Translation (378 aa):
MKEQLPDLHSHFSDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSKEDL
LQADFEGALKFFRVQLPKRYRAEENARRLMEQACNIKVPTKKLKKYEKEYQTMRESQLQQEDPMDRYKRE
NRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLLTKQRLVETEEEKRKQEEETAQ
LKEVFRKQLEKAEYEIKKTTAIIAEYKQICSQLSTRLEKQQAASKEELEVVKGKMMACKHCSDIFSKEGA
LKLAATGREDQGIETDDEKDSLKKQLREMELELAQTKLQLVEAKCKIQELEHQRGALMNEIQAAKNSWFS
KTLNSIKTATGTQPLQPAPVTQPPKEST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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