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Report for CCDS91115.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91115.1 Public Homo sapiens 1 RABGAP1L 24 110 108 CCDS HistoryNCBI Gene:9910Re-query CCDS DB by CCDS ID:91115.1Re-query CCDS DB by GeneID:9910See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91115.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325589.9 ENSP00000318603.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000325589.9Link to Ensembl Protein Viewer:ENSP00000318603.5Re-query CCDS DB by Nucleotide ID:ENST00000325589Re-query CCDS DB by Protein ID:ENSP00000318603
Original member Current member NCBI NM_001366450.1 NP_001353379.1 Accepted alive Link to Nucleotide Sequence:NM_001366450.1Link to Protein Sequence:NP_001353379.1Re-query CCDS DB by Nucleotide ID:NM_001366450Re-query CCDS DB by Protein ID:NP_001353379Link to BLAST:NP_001353379.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353379.1 358 Q5R372-7 358 100% 0 0

Chromosomal Locations for CCDS 91115.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 174702167 174702256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174752313 174752354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174811832 174811960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174957457 174957549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174969277 174969387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174976078 174976182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174978807 174978890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174982834 174982905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174988641 174988838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 174989849 174990001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1077 nt):
ATGTATGCATCCCAGTGGTTTCTCACTCTTTTTACTGCCAAGTTCCCACTCTGCATGGTGTTCCACATCA
TTGACTTACTGCTTTGTGAGGGTTTGAACATAATCTTTCATGTAGCTTTGGCTCTCCTAAAGACCTCAAA
GGAAGACCTTCTGCAGGCTGATTTTGAAGGTGCTTTAAAGTTCTTTAGAGTTCAGCTTCCAAAGAGATAC
AGGGCAGAGGAAAATGCAAGAAGACTGATGGAGCAGGCTTGCAATATTAAAGTACCAACCAAGAAGCTGA
AGAAATATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATGGATAGATA
CAAGAGGGAGAACCGAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAGAGAATGATGACCTTGCCCAT
GAACTAGTAACAAGCAAAATTGCTCTACGGAATGACTTGGATCAGGCAGAAGACAAGGCAGATGTGTTGA
ATAAAGAGCTCCTTTTGACCAAACAGAGGCTGGTGGAGACTGAAGAGGAGAAGAGGAAGCAAGAGGAAGA
GACTGCCCAGCTAAAAGAAGTCTTCAGGAAACAGCTAGAGAAGGCAGAATATGAAATAAAGAAGACTACA
GCTATCATTGCTGAGTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGCAAGCAGCCA
GCAAGGAGGAGCTGGAAGTGGTAAAGGGTAAGATGATGGCATGCAAACACTGCAGTGACATTTTCAGCAA
GGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGATGATGAGAAGGAC
TCACTTAAGAAGCAGCTGAGAGAGATGGAACTGGAACTGGCACAAACCAAACTGCAGTTGGTGGAGGCCA
AGTGTAAAATTCAGGAACTTGAACATCAGAGAGGAGCCCTTATGAATGAAATCCAAGCTGCGAAAAACTC
TTGGTTTAGCAAAACCCTGAACTCTATCAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCGGTC
ACCCAGCCACCCAAGGAGAGCACATAG

Translation (358 aa):
MYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSKEDLLQADFEGALKFFRVQLPKRY
RAEENARRLMEQACNIKVPTKKLKKYEKEYQTMRESQLQQEDPMDRYKRENRRLQEASMRLEQENDDLAH
ELVTSKIALRNDLDQAEDKADVLNKELLLTKQRLVETEEEKRKQEEETAQLKEVFRKQLEKAEYEIKKTT
AIIAEYKQICSQLSTRLEKQQAASKEELEVVKGKMMACKHCSDIFSKEGALKLAATGREDQGIETDDEKD
SLKKQLREMELELAQTKLQLVEAKCKIQELEHQRGALMNEIQAAKNSWFSKTLNSIKTATGTQPLQPAPV
TQPPKEST


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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