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Report for CCDS91128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91128.1 Public Homo sapiens 1 EDEM3 24 110 108 CCDS HistoryNCBI Gene:80267Re-query CCDS DB by CCDS ID:91128.1Re-query CCDS DB by GeneID:80267See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91128.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367512.8 ENSP00000356482.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367512.8Link to Ensembl Protein Viewer:ENSP00000356482.4Re-query CCDS DB by Nucleotide ID:ENST00000367512Re-query CCDS DB by Protein ID:ENSP00000356482
Original member Current member NCBI NM_001319960.2 NP_001306889.1 Accepted alive Link to Nucleotide Sequence:NM_001319960.2Link to Protein Sequence:NP_001306889.1Re-query CCDS DB by Nucleotide ID:NM_001319960Re-query CCDS DB by Protein ID:NP_001306889Link to BLAST:NP_001306889.1

Chromosomal Locations for CCDS 91128.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 184694063 184694472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184701497 184701544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184702811 184702996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184706643 184706808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184708153 184708344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184710394 184710547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184711723 184711877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184712433 184712598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184716888 184717012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184717540 184717623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184719162 184719245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184719443 184719568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184721289 184721386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184723751 184723856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184726255 184726389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184732837 184732990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184734531 184734643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184737025 184737064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184737611 184737711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184749547 184749592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184754489 184754646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2847 nt):
ATGAGCGAAGCCGGCGGCCGGGGCTGTGGGTCCCCGGTTCCCCAGCGAGCGCGATGGAGACTAGTGGCGG
CG
ACGGCCGCGTTCTGCCTGGTGTCGGCCACCTCCGTGTGGACGGCGGGGGCCGAGCCCATGAGTAGGGA
G
GAGAAACAGAAGCTTGGGAATCAAGTACTGGAAATGTTTGATCATGCTTATGGTAACTATATGGAACAT
GCT
TACCCTGCTGATGAACTCATGCCTTTAACCTGTAGAGGTCGAGTTAGAGGCCAAGAGCCAAGTCGCG
GT
GACGTTGATGATGCCTTGGGAAAATTTTCTCTGACACTGATTGATTCTTTGGACACTCTTGTGGTTTT
A
AATAAAACTAAAGAATTTGAAGATGCAGTGAGAAAAGTTTTAAGAGATGTTAATTTAGATAACGATGTA
GTC
GTATCAGTCTTTGAAACAAACATCAGAGTTCTTGGGGGTCTTTTGGGTGGGCACTCCCTGGCAATCA
TG
CTGAAAGAAAAAGGTGAATATATGCAGTGGTACAATGATGAACTTCTCCAAATGGCAAAGCAGTTAGG
T
TACAAACTTTTACCGGCTTTCAACACTACCAGTGGCCTTCCTTATCCAAGAATTAATTTAAAGTTTGGC
ATC
AGAAAACCAGAAGCTCGGACAGGAACTGAGACAGATACCTGTACAGCTTGTGCAGGTACCTTGATCC
TT
GAATTTGCTGCTTTAAGTCGATTCACAGGAGCAACAATATTTGAGGAATATGCCAGAAAAGCTCTTGA
T
TTTCTCTGGGAAAAAAGACAGCGAAGTAGTAATTTAGTGGGCGTGACTATAAATATTCATACTGGAGAT
TGG
GTACGAAAAGATAGTGGAGTTGGAGCAGGGATTGATTCATATTATGAATATCTGTTGAAAGCCTATG
TC
TTGCTTGGAGATGACAGTTTTCTGGAAAGATTTAACACACACTATGATGCCATAATGAGGTATATTAG
C
CAGCCACCTCTTCTACTTGATGTGCATATCCACAAACCAATGCTGAATGCTCGGACTTGGATGGATGCT
TTG
CTTGCCTTCTTCCCAGGCTTGCAGGTGTTAAAGGGGGATATTAGACCTGCTATTGAAACTCATGAAA
TG
TTATATCAGGTGATTAAAAAACACAATTTTCTACCAGAGGCATTTACCACAGATTTCAGAGTACACTG
G
GCTCAACATCCTTTAAGGCCAGAATTTGCAGAAAGTACCTACTTCTTATATAAAGCTACAGGAGATCCT
TAC
TACCTTGAAGTAGGGAAGACACTTATTGAAAATTTAAATAAATATGCTAGAGTGCCTTGCGGATTTG
CT
GCCATGAAGGATGTTCGTACTGGAAGTCATGAGGACAGAATGGATTCTTTCTTCTTGGCTGAAATGTT
T
AAATATCTTTACCTGTTATTTGCTGATAAAGAAGACATTATTTTTGACATAGAAGATTACATCTTTACA
ACA
GAAGCTCATCTGTTACCTCTTTGGCTCTCTACTACAAATCAAAGCATCTCTAAAAAGAACACAACCT
CG
GAATATACAGAACTGGATGACAGTAACTTCGATTGGACTTGTCCAAATACTCAGATCCTCTTTCCTAA
T
GACCCATTGTATGCTCAAAGTATTCGTGAGCCCTTGAAAAATGTGGTGGATAAGAGCTGTCCTAGAGGC
ATC
ATCAGAGTAGAGGAGAGTTTCAGGAGTGGAGCTAAACCCCCTCTGAGAGCCAGAGATTTCATGGCCA
CT
AACCCTGAGCATTTAGAAATCCTGAAGAAGATGGGGGTGAGTTTGATTCACCTCAAAGATGGGAGAGT
C
CAGTTGGTCCAACATGCAATCCAAGCTGCTAGTTCAATCGACGCTGAAGATGGGTTGAGGTTCATGCAG
GAG
ATGATTGAATTGTCAAGTCAGCAACAAAAAGAACAGCAGCTGCCTCCACGAGCTGTACAAATTGTTT
CC
CACCCATTTTTTGGCAGGGTAGTATTGACTGCTGGACCAGCTCAGTTTGGGCTGGATCTGTCTAAACA
T
AAAGAGACAAGAGGATTTGTTGCAAGCAGTAAACCATCCAATGGTTGTTCAGAGCTTACTAACCCAGAG
GCA
GTGATGGGAAAAATCGCACTGATACAAAGAGGACAGTGCATGTTTGCAGAAAAGGCACGCAACATCC
AG
AATGCTGGAGCCATTGGTGGCATTGTTATTGATGACAATGAGGGGAGCAGCAGTGATACTGCCCCTCT
G
TTCCAGATGGCAGGTGATGGAAAGGATACAGATGACATCAAGATCCCCATGCTGTTCTTATTCAGCAAA
GAA
GGAAGTATCATACTGGATGCCATCCGGGAATATGAGGAGGTAGAAGTGCTCCTCTCTGATAAAGCAA
AA
GATCGAGCAGCAATATTAAAAGGTAAAATGATTCCAAGCTACATTATTAATAGTAATCCTGAAATGGA
A
AATGAAGAACAACCATCCTCTGAAAATGATTCTCAGAATCAGAGTGGTGAACAGATTTCATCAAGTTCT
CAG
GAGGTTGATTTGGTTGATCAAGAGTCTTCTGAGGAAAATTCTCTAAATTCTCACCCAGAATCATTAT
CT
CTAGCAGATATGGACAATGCTGCAAGCATTTCCCCTTCTGAACAGACTTCTAATCCCACAGAAAACCA
T
GAGACTACAAATCTTAATGGTGAATGTACAGATTTAGATAACCAGCTTCAAGAACAATCAGAAACTGAG
GAA
GATTCCAATCCTAATGTTAGCTGGGGTAAAAAGGTCCAGCCTATAGACTCCATATTAGCAGACTGGA
AT
GAAGATATAGAAGCATTTGAAATGATGGAGAAGGATGAGCTATGA


Translation (948 aa):
MSEAGGRGCGSPVPQRARWRLVAATAAFCLVSATSVWTAGAEPMSREEKQKLGNQVLEMFDHAYGNYMEH
A
YPADELMPLTCRGRVRGQEPSRGDVDDALG
KFSLTLIDSLDTLVVLNKTKEFEDAVRKVLRDVNLDNDV
V
VSVFETNIRVL
GGLLGGHSLAIMLKEKGEYMQWYNDELLQMAKQLGYKLLPAFNTTSGLPYPRINLKFG
I
RKPEARTGTETDTCTACAGTLILEFAALSRFTGATIFE
EYARKALDFLWEKRQRSSNLVGVTINIHTGD
W
VRK
DSGVGAGIDSYYEYLLKAYVLLGDDSFLERFNTHYDAIMRYISQPPLLLDVHIHKPMLNARTWMDA
L
LAFFPGLQ
VLKGDIRPAIETHEMLYQVIKKHNFLPEAFTTDFRVHWAQHPLRPEFAESTYFLYKATGDP
Y
YLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHED
RMDSFFLAEMFKYLYLLFADKEDIIFDIEDYIFT
T
EAHLLPLWLSTTNQSISKKNT
TSEYTELDDSNFDWTCPNTQILFPNDPLYAQSIREPLKNVVDKSCPRG
I
IR
VEESFRSGAKPPLRARDFMATNPEHLEILKKMGVSLIHLKDGRVQLVQHAIQAASSIDAEDGLRFMQ
E
MIELSSQQQKEQQLPPRAVQIVSHPFFGRVVLTAGPAQFGLDLSKHKE
TRGFVASSKPSNGCSELTNPE
A
VMGKIALIQRGQCMFAEKARNIQNAGAIGGIVI
DDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSK
E
GSIILDAIREYEEVEVLLSDKAKDR
AAILKGKMIPSYIINSNPEMENEEQPSSENDSQNQSGEQISSSS
Q
EVDLVDQESSEENSLNSHPESLSLADMDNAASISPSEQTSNPTENHETTNLNGECTDLDNQLQEQSETE
E
DSNPNVSWGKKVQPIDSILADWNEDIEAFEMMEKDEL




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser