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Report for CCDS91366.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91366.1 Public Homo sapiens 10 NSMCE4A 24 110 108 CCDS HistoryNCBI Gene:54780Re-query CCDS DB by CCDS ID:91366.1Re-query CCDS DB by GeneID:54780See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91366.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369017.5 ENSP00000358013.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369017.5Link to Ensembl Protein Viewer:ENSP00000358013.5Re-query CCDS DB by Nucleotide ID:ENST00000369017Re-query CCDS DB by Protein ID:ENSP00000358013
Current member NCBI NM_001411073.1 NP_001398002.1 Accepted alive Link to Nucleotide Sequence:NM_001411073.1Link to Protein Sequence:NP_001398002.1Re-query CCDS DB by Nucleotide ID:NM_001411073Re-query CCDS DB by Protein ID:NP_001398002Link to BLAST:NP_001398002.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001398002.1 316 Q9NXX6-2 316 100% 0 0

Chromosomal Locations for CCDS 91366.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 121962001 121962107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121963238 121963328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121965286 121965385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121967655 121967806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121970939 121971069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121974004 121974081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121974874 121975165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGTCTGGGGACAGCAGCGGCCGCGGGCCAGAGGGCCGGGGCCGGGGCCGCGACCCGCATCGGGATCGCA
CCCGCTCCCGCTCCCGCTCGCGGTCCCCTTTGTCGCCCAGGTCCCGCCGCGGCTCTGCGCGGGAGCGCAG
AGAGGCCCCAGAGCGCCCGAGCCTGGAGGACACAGAGCCGTCGGATTCCGGGGACGAGATGATGGACCCG
GCCAGCTTGGAGGCGGAGGCCGACCAAGGCCTGTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCA
ACTCCGTCCAACAAAACCGTGAGGACATACTGAATGCCGGTGACAAATTAACAGAGGTCCTTGAAGAGGC
TAACACTCTGTTTAATGAAGTGTCCCGAGCAAGAGAAGCAGTCCTGGATGCCCACTTTCTTGTTTTGGCT
TCAGATTTGGGCAAAGAGAAAGCAAAGCAGCTGCGCTCAGACCTGAGCTCCTTTGACATGTTAAGATATG
TTGAAACTCTACTCACACATATGGGTGTAAATCCGCTAGAAGCTGAAGAACTCATCCGTGATGAAGATAG
TCCTGATTTTGAATTCATAGTCTATGACTCCTGGAAGATAACAGGCAGAACAGCAGAAAACACCTTTAAT
AAAACCCATACATTCCACTTTCTGTTGGGTTCAATATACGGAGAGTGCCCTGTGCCAAAGCCACGAGTTG
ATCGTCCAAGAAAAGTTCCTGTGATACAAGAGGAGAGGGCAATGCCTGCCCAGTTAAGAAGAATGGAAGA
ATCTCATCAAGAAGCAACAGAGAAAGAAGTAGAAAGAATCTTGGGATTGTTGCAGACATATTTTCGAGAA
GATCGAGACAGTCTCACTCTTTCGCCCAGACTGGAATGCAGTGGCACCATCTCAACTCACTGCAACCTCC
ACCTCCTGGATTCAAGCAATTCTCCTGCCTCAGCCTCCTGA

Translation (316 aa):
MSGDSSGRGPEGRGRGRDPHRDRTRSRSRSRSPLSPRSRRGSARERREAPERPSLEDTEPSDSGDEMMDP
ASLEAEADQGLCRQIRHQYRALINSVQQNREDILNAGDKLTEVLEEANTLFNEVSRAREAVLDAHFLVLA
SDLGKEKAKQLRSDLSSFDMLRYVETLLTHMGVNPLEAEELIRDEDSPDFEFIVYDSWKITGRTAENTFN
KTHTFHFLLGSIYGECPVPKPRVDRPRKVPVIQEERAMPAQLRRMEESHQEATEKEVERILGLLQTYFRE
DRDSLTLSPRLECSGTISTHCNLHLLDSSNSPASAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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