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Report for CCDS9159.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9159.1 Public Homo sapiens 12 NAA25 24 110 108 CCDS HistoryNCBI Gene:80018Re-query CCDS DB by CCDS ID:9159.1Re-query CCDS DB by GeneID:80018See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9159.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261745.9 ENSP00000261745.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261745.9Link to Ensembl Protein Viewer:ENSP00000261745.4Re-query CCDS DB by Nucleotide ID:ENST00000261745Re-query CCDS DB by Protein ID:ENSP00000261745
Original member Current member NCBI NM_024953.4 NP_079229.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024953.4Link to Protein Sequence:NP_079229.2Re-query CCDS DB by Nucleotide ID:NM_024953Re-query CCDS DB by Protein ID:NP_079229Link to BLAST:NP_079229.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079229.2 972 Q14CX7-1 972 100% 0 0

Chromosomal Locations for CCDS 9159.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 112029531 112029653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112033233 112033379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112039229 112039339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112040481 112040578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112042039 112042104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112043088 112043211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112043625 112043868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112047665 112047790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112048292 112048443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112053558 112053657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112054388 112054568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112060270 112060359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112061181 112061388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112068880 112068992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112071895 112072064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112074675 112074764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112075678 112075789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112078188 112078266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112078634 112078741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112081060 112081134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112087683 112087801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112090726 112090864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112093051 112093136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112108716 112108773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2919 nt):
ATGGCGACGCGGGGCCATGTGCAGGACCCTAACGACAGGCGCCTCCGGCCCATTTACGATTATCTTGACA
ATGGTAATAATAAAATGGCAATTCAGCAAGCAGATAAACTGTTGAAGAAACATAAGGATCTTCATTGTGC
TAAGGTTTTAAAGGCAATTGGTTTACAGAGAACTGGAAAGCAAGAGGAAGCCTTTACTCTTGCACAGGAG
GTGGCAGCCCTTGAACCCACAGATGACAACTCACTGCAGGCACTGACTATCCTTTACCGGGAGATGCACC
GACCGGAGTTAGTTACAAAACTTTATGAGGCAGCTGTGAAGAAAGTTCCCAATAGTGAGGAGTATCACTC
TCACCTCTTCATGGCCTATGCCAGAGTGGGTGAATACAAGAAAATGCAACAGGCTGGCATGGCTCTATAT
AAGATTGTCCCCAAAAATCCCTACTACTTTTGGTCTGTGATGAGCTTAATTATGCAATCTATATCGGCAC
AGGATGAAAACCTCTCAAAAACAATGTTTCTGCCCCTTGCTGAGAGAATGGTCGAAAAAATGGTGAAAGA
GGACAAGATAGAAGCTGAGGCTGAAGTTGAACTTTATTATATGATCCTGGAACGTTTGGGAAAGTACCAG
GAGGCCTTGGATGTCATCAGAGGGAAATTAGGAGAGAAGTTGACAAGTGAGATTCAGAGTCGGGAAAATA
AATGCATGGCTATGTACAAGAAGCTGAGCAGGTGGCCAGAGTGCAATGCCCTTTCCCGGCGCCTCTTACT
AAAAAACTCAGATGACTGGCAGTTCTATCTGACTTATTTCGATTCTGTCTTTCGACTGATTGAAGAGGCC
TGGAGTCCTCCTGCTGAAGGTGAACACTCTTTAGAAGGAGAAGTACATTATTCTGCAGAAAAAGCTGTGA
AGTTTATAGAAGATCGGATAACGGAAGAATCTAAAAGTTCTCGCCATCTCCGAGGACCACATCTAGCTAA
ATTGGAGCTGATTAGGCGTTTACGAAGTCAAGGTTGTAACGATGAGTACAAACTGGGTGATCCAGAAGAA
TTAATGTTCCAGTATTTTAAAAAGTTTGGCGATAAACCTTGTTGTTTTACAGACCTTAAGGTGTTTGTTG
ACCTCTTACCTGCTACACAGTGTACAAAATTTATTAATCAGTTACTTGGAGTTGTTCCTTTGTCGACACC
AACAGAGGATAAGCTGGCACTGCCTGCTGACATCAGAGCTCTGCAGCAACATTTGTGTGTGGTGCAGCTG
ACGAGGTTACTTGGCTTGTACCACACCATGGATAAAAATCAGAAATTGAGTGTGGTCAGAGAATTGATGT
TAAGGTACCAGCATGGACTGGAATTTGGGAAAACCTGTTTGAAAACAGAATTGCAATTTTCTGACTATTA
CTGTCTCCTTGCTGTCCATGCGCTTATTGATGTATGGAGGGAAACAGGTGATGAGACCACTGTGTGGCAG
GCCCTGACTTTGCTGGAAGAGGGATTAACCCATAGCCCTTCCAATGCTCAGTTCAAATTGCTGCTTGTTC
GAATCTACTGTATGCTGGGTGCATTTGAACCAGTGGTGGATCTTTACTCCAGCCTCGATGCTAAGCATAT
CCAGCATGATACCATTGGTTATCTTTTGACCCGATATGCTGAATCTCTAGGTCAGTATGCTGCTGCGTCC
CAATCCTGTAACTTCGCACTCAGGTTTTTTCACTCCAACCAGAAAGATACCTCAGAATATATTATTCAAG
CTTACAAATATGGTGCATTTGAGAAGATCCCAGAGTTTATCGCTTTTAGGAACAGGCTGAATAATTCTCT
TCATTTTGCACAAGTCCGTACTGAACGGATGCTGTTAGACCTTCTACTTGAAGCAAATATATCAACCAGT
TTAGCAGAAAGTATAAAGTCAATGAACCTTAGGCCAGAAGAAGATGACATTCCATGGGAAGATTTGCGAG
ACAACAGAGACTTAAATGTTTTTTTCAGCTGGGATCCAAAAGACAGGGACGTTTCTGAAGAACATAAGAA
ACTTTCCTTAGAGGAGGAGACCTTGTGGTTAAGAATCCGATCCTTAACATTGAGGCTGATAAGTGGACTT
CCAAGTCTCAACCACCCTGTGGAGCCAAAGAACTCGGAGAAGACTGCCGAGAATGGGGTATCCTCCCGGA
TTGATATTCTTCGTTTGCTCCTTCAACAGCTGGAGGCAACCCTGGAGACAGGAAAGCGATTTATTGAGAA
GGATATTCAGTATCCTTTCCTTGGTCCTGTACCTACCAGAATGGGTGGATTCTTTAATTCTGGCTGTTCT
CAGTGCCAGATAAGCTCTTTTTATCTTGTCAATGATATTTATGAGCTGGATACCAGTGGTTTAGAGGATA
CAATGGAGATTCAGGAACGAATAGAAAATAGTTTTAAGTCTTTACTAGACCAGTTAAAAGATGTCTTCAG
TAAATGTAAAGGTGACCTCTTAGAAGTTAAAGATGGTAACTTGAAAACACATCCTACTCTTTTAGAAAAT
CTAGTTTTCTTTGTTGAGACTATTTCTGTTATCCTTTGGGTATCCAGTTACTGTGAGAGTGTCCTACGAC
CATACAAACTAAATTTACAGAAAAAGAAAAAGAAGAAAAAAGAAACCAGCATCATCATGCCACCTGTCTT
TACCAGTTTCCAAGACTATGTTACTGGGCTTCAGACTTTAATTTCCAATGTTGTGGATCATATTAAAGGG
CTTGAAACACATCTAATTGCACTTAAACTTGAAGAACTTATTTTAGAAGACACTTCTCTCTCACCGGAAG
AGAGAAAATTTTCAAAGACTGTGCAAGGGAAGGTGCAGAGCAGTTATCTGCACTCACTTCTGGAAATGGG
GGAGCTGCTGAAAAAAAGACTTGAGACCACAAAGAAACTAAAAATTTAA

Translation (972 aa):
MATRGHVQDPNDRRLRPIYDYLDNGNNKMAIQQADKLLKKHKDLHCAKVLKAIGLQRTGKQEEAFTLAQE
VAALEPTDDNSLQALTILYREMHRPELVTKLYEAAVKKVPNSEEYHSHLFMAYARVGEYKKMQQAGMALY
KIVPKNPYYFWSVMSLIMQSISAQDENLSKTMFLPLAERMVEKMVKEDKIEAEAEVELYYMILERLGKYQ
EALDVIRGKLGEKLTSEIQSRENKCMAMYKKLSRWPECNALSRRLLLKNSDDWQFYLTYFDSVFRLIEEA
WSPPAEGEHSLEGEVHYSAEKAVKFIEDRITEESKSSRHLRGPHLAKLELIRRLRSQGCNDEYKLGDPEE
LMFQYFKKFGDKPCCFTDLKVFVDLLPATQCTKFINQLLGVVPLSTPTEDKLALPADIRALQQHLCVVQL
TRLLGLYHTMDKNQKLSVVRELMLRYQHGLEFGKTCLKTELQFSDYYCLLAVHALIDVWRETGDETTVWQ
ALTLLEEGLTHSPSNAQFKLLLVRIYCMLGAFEPVVDLYSSLDAKHIQHDTIGYLLTRYAESLGQYAAAS
QSCNFALRFFHSNQKDTSEYIIQAYKYGAFEKIPEFIAFRNRLNNSLHFAQVRTERMLLDLLLEANISTS
LAESIKSMNLRPEEDDIPWEDLRDNRDLNVFFSWDPKDRDVSEEHKKLSLEEETLWLRIRSLTLRLISGL
PSLNHPVEPKNSEKTAENGVSSRIDILRLLLQQLEATLETGKRFIEKDIQYPFLGPVPTRMGGFFNSGCS
QCQISSFYLVNDIYELDTSGLEDTMEIQERIENSFKSLLDQLKDVFSKCKGDLLEVKDGNLKTHPTLLEN
LVFFVETISVILWVSSYCESVLRPYKLNLQKKKKKKKETSIIMPPVFTSFQDYVTGLQTLISNVVDHIKG
LETHLIALKLEELILEDTSLSPEERKFSKTVQGKVQSSYLHSLLEMGELLKKRLETTKKLKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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