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Report for CCDS91598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91598.1 Public Homo sapiens 11 NXPE1 24 110 108 CCDS HistoryNCBI Gene:120400Re-query CCDS DB by CCDS ID:91598.1Re-query CCDS DB by GeneID:120400See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 91598.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000534921.3 ENSP00000439503.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000534921.3Link to Ensembl Protein Viewer:ENSP00000439503.2Re-query CCDS DB by Nucleotide ID:ENST00000534921Re-query CCDS DB by Protein ID:ENSP00000439503
Original member Current member EBI ENST00000696071.1 ENSP00000512373.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696071.1Link to Ensembl Protein Viewer:ENSP00000512373.1Re-query CCDS DB by Nucleotide ID:ENST00000696071Re-query CCDS DB by Protein ID:ENSP00000512373
Original member Current member NCBI NM_001367953.1 NP_001354882.1 Accepted alive Link to Nucleotide Sequence:NM_001367953.1Link to Protein Sequence:NP_001354882.1Re-query CCDS DB by Nucleotide ID:NM_001367953Re-query CCDS DB by Protein ID:NP_001354882Link to BLAST:NP_001354882.1
Original member Current member NCBI NM_001395504.1 NP_001382433.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395504.1Link to Protein Sequence:NP_001382433.1Re-query CCDS DB by Nucleotide ID:NM_001395504Re-query CCDS DB by Protein ID:NP_001382433Link to BLAST:NP_001382433.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001354882.1 547 Q8N323-1 547 100% 0 0
NP_001382433.1 547 Q8N323-1 547 100% 0 0

Chromosomal Locations for CCDS 91598.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 114521968 114522503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114522879 114523091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114527840 114527901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114530175 114530908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114551103 114551201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1644 nt):
ATGTCCTCAAATACAATGCTTCAAAAAACGCTGCTGATCTTGATCTCTTTTTCAGTAGTAACCTGGATGA
TTTTTATAATTTCTCAGAACTTCACAAAGCTTTGGTCTGCTCTAAACTTATCCATCTCTGTCCATTACTG
GAACAACTCCGCAAAGTCCTTATTCCCTAAAACATCACTGATACCATTAAAGCCACTAACAGAGACTGAA
CTCAGAATAAAGGAAATCATAGAGAAACTAGATCAGCAGATCCCACCCAGACCTTTCACCCATGTGAACA
CCACCACCAGTGCCACACACAGCACAGCCACCATCCTCAACCCTCGAGATACATACTGCAGGGGAGACCA
GCTGGACATCCTACTGGAGGTGAGGGACCACTTGGGACAGAGGAAGCAATATGGTGGGGATTTCCTGAGG
GCCAGGATGTCCTCCCCAGCACTGACGGCAGGTGCTTCAGGAAAGGTGATGGACTTCAACAATGGCACCT
ACCTGGTCAGCTTCACTCTGTTCTGGGAGGGCCAGGTCTCCCTGTCTCTGCTGCTCATCCACCCCAGTGA
AGGGGCGTCGGCTCTCTGGAGGGCAAGGAACCAAGGCTATGATAAAATTATTTTCAAAGGCAAATTTGTT
AATGGCACCTCTCATGTCTTCACTGAATGTGGCCTGACCCTAAACTCAAATGCTGAACTCTGTGAATATC
TGGATGACAGAGACCAAGAAGCCTTCTATTGTATGAAGCCTCAACACATGCCCTGTGAGGCTCTGACCTA
CATGACCACCCGGAATAGAGAGGTATCTTATCTTACAGACAAGGAAAACAGCCTTTTCCACAGGTCCAAA
GTGGGAGTTGAAATGATGAAGGATCGTAAACACATTGATGTCACTAATTGTAACAAGAGAGAAAAAATAG
AAGAGACATGCCAAGTTGGAATGAAGCCTCCTGTCCCTGGTGGTTATACTTTACAAGGAAAATGGATAAC
AACATTTTGCAACCAGGTTCAGTTAGACACAATTAAGATAAATGGCTGTTTGAAAGGCAAACTCATTTAC
CTCCTGGGAGACTCTACACTACGTCAGTGGATCTACTACTTCCCCAAAGTTGTAAAAACACTGAAGTTTT
TTGATCTTCATGAAACTGGAATCTTTAAGAAACATTTGCTTCTGGATGCAGAAAGACACACTCAGATTCA
ATGGAAAAAACATAGCTATCCCTTCGTCACTTTCCAGCTCTACTCTCTGATAGATCATGATTATATCCCT
CGGGAAATTGACCGGCTATCAGGTGACAAAAACACAGCCATCGTCATCACCTTTGGCCAGCACTTTAGAC
CATTTCCCATTGACATTTTTATTCGCAGGGCCATCGGTGTTCAAAAGGCTATTGAAAGACTGTTCCTAAG
AAGCCCAGCCACTAAAGTGATTATTAAGACAGAAAACATCAGGGAGATGCACATAGAGACAGAGAGGTTT
GGAGACTTCCATGGTTATATTCACTATCTTATCATGAAGGATATTTTCAAAGACCTCAACGTGGGCATCA
TTGATGCCTGGGACATGACCATTGCATATGGCACTGACACTATCCACCCACCTGATCATGTGATTGGAAA
TCAGATTAACATGTTCTTAAACTACATTTGCTAA

Translation (547 aa):
MSSNTMLQKTLLILISFSVVTWMIFIISQNFTKLWSALNLSISVHYWNNSAKSLFPKTSLIPLKPLTETE
LRIKEIIEKLDQQIPPRPFTHVNTTTSATHSTATILNPRDTYCRGDQLDILLEVRDHLGQRKQYGGDFLR
ARMSSPALTAGASGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPSEGASALWRARNQGYDKIIFKGKFV
NGTSHVFTECGLTLNSNAELCEYLDDRDQEAFYCMKPQHMPCEALTYMTTRNREVSYLTDKENSLFHRSK
VGVEMMKDRKHIDVTNCNKREKIEETCQVGMKPPVPGGYTLQGKWITTFCNQVQLDTIKINGCLKGKLIY
LLGDSTLRQWIYYFPKVVKTLKFFDLHETGIFKKHLLLDAERHTQIQWKKHSYPFVTFQLYSLIDHDYIP
REIDRLSGDKNTAIVITFGQHFRPFPIDIFIRRAIGVQKAIERLFLRSPATKVIIKTENIREMHIETERF
GDFHGYIHYLIMKDIFKDLNVGIIDAWDMTIAYGTDTIHPPDHVIGNQINMFLNYIC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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