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Report for CCDS91619.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91619.1 Public Homo sapiens 11 VSIG10L2 24 110 108 CCDS HistoryNCBI Gene:338667Re-query CCDS DB by CCDS ID:91619.1Re-query CCDS DB by GeneID:338667See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91619.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000686984.1 ENSP00000509422.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000686984.1Link to Ensembl Protein Viewer:ENSP00000509422.1Re-query CCDS DB by Nucleotide ID:ENST00000686984Re-query CCDS DB by Protein ID:ENSP00000509422
Original member Current member NCBI NM_001365077.2 NP_001352006.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001365077.2Link to Protein Sequence:NP_001352006.1Re-query CCDS DB by Nucleotide ID:NM_001365077Re-query CCDS DB by Protein ID:NP_001352006Link to BLAST:NP_001352006.1

Chromosomal Locations for CCDS 91619.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 125946056 125946137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125947686 125948036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125948305 125948580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125950014 125950289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125950910 125951158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125951813 125952073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125953400 125953690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125954087 125954383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125955057 125955179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125955482 125955506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125955615 125955667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125955817 125955914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2382 nt):
ATGGTGGGTCAGAGGGCCCAGCACAGCCCAGTCAGCCTCCTGCTGCTGATACACCTCTGCCTTCTGCACC
TGAGGGCCTCAGGCCAGCCCCACCCGACCCCCGAGGCCCCTGTAGAGGAGGTGGTGTCTGTCCAGGGAGT
GCGAGGTGGCTCCGTGGAGCTGGCCTGTGGCTCAGGGCCTGCCCCGCTGCTGGTCCTCTGGAGCTTCACC
CCCCTGGGCTCCCTGGTTCCCCGGCCTGTGGCCGTCACCGATGGAGCCATGTCCAAGGTGGAGGCCATCG
CCTCGGCTCTGGGAGTCGTGAGTCTGAGGAACAGCAGCCTGGTGCTGGGGGAGCTTCACGAGGGTGCCCG
TGGCCACTTCCTATGCCAGGTTCTGCACGTGGCTGGCGGCCAGCTCCACGCTGCCTACTCCCACCTCACG
CTGGCTGTGCTGGTGCCGGTGTCCAAGCCTCAAGTGCGACTGAGTAACCCGTCCCCTGTGGAGGGAGCCT
CCGTGGTGGCCACGTGTGCAGTGCGGGAGGGCACAGAGCCCGTGACCTTTGCCTGGCAGCATCGGGCACC
CCGAGGCCTTGGAGAGGCCCTGGTGGGGGTCACTGAGCCACTATTCCAGCTGGACCCTGTCAACCGGACA
CACCTAGGGTGGTACATGTGCAGCGCCAGCAACTCCGTGAACAGGCTGAGCAGTGACGGGGCCTTCCTGG
ACGTCATTTATGGTCCTGACAAGCCTGTGATCACCATGGAGCCGCTGGGACTCACTGAGGAGGGCTTCTG
GGCCAGTGAGAGGGAAGAGGTGACCCTGAGCTGTCTGGCTGCCTCCAACCCACCTAGTCACTATGTGTGG
CTCCGTGACCACACGCAAGTCCACACGGGGCCTACCTATGTCATCGCCAGAGCTGGCCGTGTCCACACAG
GCCTGTACACCTGCCTGGCCCGCAACAGCTACCTGGACACCCGCACCCAGACTACTGTCCAGCTCACCAT
CTACTATCCCCCTGAGGGACAGCCCTCCTGTGCAGTGCATCCCAGCCCTGAGGCTGTGACCCTGCTCTGT
GCCTGGCCTGGGGGGCTTCCGCCTGCCCAACTGCAGTGGGAAGGGCCTCAGGGACCTGGCCCTACTGCCC
CCAGCAACGTCACCTGGAGTCACGCAGCCGCCCAGCTCCCCAGTGGCAGCGTCTTCACCTGCACTGGCCA
GCACCCAGCCCTGGCACCGCCTGCCCTCTGCACAGTCATGCTCTGGGAGCCTCTCGGGAGGCCTACCTGC
TGGAGCACAGCCACAATGGGGGACCAGTTCATCATGCTGAGCTGCGAGTGGCCTGGCGGCGAGCCCCCTG
CCACGCTGGGCTGGCTTGACGAACAGCAGCAGCCCCTGGGCGGCAGCAGCTCCTCGATGGCCGTTCACCT
CCTGCAGGCCCAAGAAGATCTGGCTGGCAGAGAGTTCACCTGCCGGGGCACTCACCTGCTCAGGACCCCT
GACCCCCACTGCCACCTCCAGCTGGAAGCCCCACAGCTGGACGTGGCTGAGCCCCGCGTGTCAGTGTTGG
AGGGGGGAGAGGCCTGGCTGGAGTGCTCTCTCCGCGGGGGCACACCACCTGCCCAGCTCCTCTGGCTGGG
GCCTCAACAACAAAAAGTGGACCCCGGCACTTCAGGATTCATGCTGCACCCTGAGGGTGCCCAGCTGCGC
CTGGGCATCTACGATGCTGACCCGGCACACCACAGGGGCACCTACCAATGCGTGGCCCGCAACGCCGTGG
GCAATAGCAGTCAGAGTGTGCTGCTGGAGGTCCTGAGATATCCAGCTCCTCCCAATGTCACCATCAGCCG
CCTGACCTACGGGAGGCACCGGAGAGAGGTGCAGCTTCAATGGGCCATCTTAGGACCCGGGAACCTGACG
GGCTTCCTGGTGCAGCGGAAGGCCAGTGCCCTGGGCCCAGGAGCTGGGGCGTGGGAGACAGCAGCTAGTG
ACATCGAGCCAGAGAGCCGAGGACGGCGGCTGGGGGGCTTGGACCCCGGGGTCCTTTATGCCTTCCGCAT
CCTGGCTCTGAATCACCACACTGCAGGACATCCCTCTGAGGTGAAGATACCAGCGGACCCCCCCTTCAGC
GCCTACCCAGCGGTGTTGGGTGCAGCAGGCACGGGAATGGTGGTAGCAACGGTGGCCTCTCTACTGGTGT
TCCAGTATGCTGCCCGGCACCCAGAGACTTTCCCCCGCCTTGGTCAATTGCTTGTTCCCACGGAGCAAAG
GCACCAACAGAGGGGTTCCAGAGAAGATGCTGAGGCACCGGCAGGCCTTGAAACACCAACCACCACCCCA
GGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAACACCAT
AA

Translation (793 aa):
MVGQRAQHSPVSLLLLIHLCLLHLRASGQPHPTPEAPVEEVVSVQGVRGGSVELACGSGPAPLLVLWSFT
PLGSLVPRPVAVTDGAMSKVEAIASALGVVSLRNSSLVLGELHEGARGHFLCQVLHVAGGQLHAAYSHLT
LAVLVPVSKPQVRLSNPSPVEGASVVATCAVREGTEPVTFAWQHRAPRGLGEALVGVTEPLFQLDPVNRT
HLGWYMCSASNSVNRLSSDGAFLDVIYGPDKPVITMEPLGLTEEGFWASEREEVTLSCLAASNPPSHYVW
LRDHTQVHTGPTYVIARAGRVHTGLYTCLARNSYLDTRTQTTVQLTIYYPPEGQPSCAVHPSPEAVTLLC
AWPGGLPPAQLQWEGPQGPGPTAPSNVTWSHAAAQLPSGSVFTCTGQHPALAPPALCTVMLWEPLGRPTC
WSTATMGDQFIMLSCEWPGGEPPATLGWLDEQQQPLGGSSSSMAVHLLQAQEDLAGREFTCRGTHLLRTP
DPHCHLQLEAPQLDVAEPRVSVLEGGEAWLECSLRGGTPPAQLLWLGPQQQKVDPGTSGFMLHPEGAQLR
LGIYDADPAHHRGTYQCVARNAVGNSSQSVLLEVLRYPAPPNVTISRLTYGRHRREVQLQWAILGPGNLT
GFLVQRKASALGPGAGAWETAASDIEPESRGRRLGGLDPGVLYAFRILALNHHTAGHPSEVKIPADPPFS
AYPAVLGAAGTGMVVATVASLLVFQYAARHPETFPRLGQLLVPTEQRHQQRGSREDAEAPAGLETPTTTP
GLDPAQETTDSPVNVTITVTATP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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