NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS91664.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91664.1 Public Homo sapiens 12 IRAG2 24 110 108 CCDS HistoryNCBI Gene:4033Re-query CCDS DB by CCDS ID:91664.1Re-query CCDS DB by GeneID:4033See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91664.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000536173.5 ENSP00000444056.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536173.5Link to Ensembl Protein Viewer:ENSP00000444056.1Re-query CCDS DB by Nucleotide ID:ENST00000536173Re-query CCDS DB by Protein ID:ENSP00000444056
Original member Current member NCBI NM_001366549.2 NP_001353478.1 Accepted alive Link to Nucleotide Sequence:NM_001366549.2Link to Protein Sequence:NP_001353478.1Re-query CCDS DB by Nucleotide ID:NM_001366549Re-query CCDS DB by Protein ID:NP_001353478Link to BLAST:NP_001353478.1

Chromosomal Locations for CCDS 91664.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 25079679 25079763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25083423 25083493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25088100 25088157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25089614 25089677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25089763 25089790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25090057 25090197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25096910 25097044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25101178 25101325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25102198 25102241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25103837 25103899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25104009 25104058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25104361 25104462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25106943 25107050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25107817 25108060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1341 nt):
ATGGCTTCTTGTGACCTTGACAGAAACTCGCTCTGTAAGAAAGAGGAGGATACAAGATCAGCTTCTCCCA
CGATAGAGGCCCAAGGCACAAGTCCAGCTCATGATAATATTGCATTCCAAGACTCTACGAGTAAGGATAA
AACCATATTAAATCTGGAAGCCAAAGAGGAACCAGAAACAATAGAAGAACATAAAAAAGAACATGCTTCA
GGAGACTCTGTGGTTTCCCCTCTTCCTGTAACCACTGTGAAATCGGTTAACCTTAGACAAAGTGAGAACA
CTTCTGCTAATGAGAAGGAGGTGGAGGCAGAATTTCTCAGATTATCTTTGGGATTTAAGTGTGACTGGTT
TACCTTGGAGAAGAGAGTGAAGCTTGAAGAGAGGTCCCGTGACTTGGCAGAAGAAAATTTGAAGAAAGAA
ATCACTAACTGTTTAAAACTATTAGAGTCTTTAACACCTCTGTGTGAAGATGACAACCAGGCACAGGAAA
TCATTAAGAAGCTGGAGAAGAGTATAAAGTTTCTTAGCCAGTGTGCAGCACGAGTGGCCAGTAGGGCTGA
GATGTTGGGAGCCATCAATCAGGAAAGCCGGGTTAGTAAAGCAGTTGAAGTGATGATTCAGCACGTAGAA
AACTTGAAGAGGATGTATGCCAAAGAGCACGCTGAATTAGAAGAACTGAAACAGGTTCTTCTGCAGAATG
AAAGGTCTTTCAATCCTCTTGAAGATGATGATGACTGCCAAATTAAAAAACGTTCAGCTTCTCTAAACTC
CAAGCCATCTTCTCTACGAAGAGTGACTATTGCCTCTTTACCCAGAAATATTGGAAATGCAGGAATGGTG
GCTGGGATGGAAAATAATGATCGATTCAGTAGAAGGTCAAGCAGTTGGCGTATTTTGGGGTCAAAGCAGA
GTGAACACCGTCCCTCATTACCTCGATTTATTAGCACCTATTCCTGGGCAGATGCTGAAGAAGAAAAATG
TGAACTAAAAACTAAAGATGACTCAGAGCCATCTGGAGAAGAAACAGTAGAAAGGACAAGGAAGCCAAGT
CTTTCTGAAAAGAAAAATAATCCATCAAAGTGGGATGTCTCTTCAGTTTATGACACAATAGCTTCCTGGG
CAACAAATCTCAAGTCCTCCATCAGAAAGGCTAATAAGGCCCTCTGGCTCTCTATTGCATTCATTGTACT
GTTTGCAGCTTTGATGAGCTTCCTCACAGGCCAATTATTCCAGAAGTCTGTGGATGCCGCTCCCACACAG
CAAGAGGACTCATGGACGTCTCTAGAACATATCTTGTGGCCATTTACCAGACTCCGACACAATGGGCCAC
CACCAGTGTGA

Translation (446 aa):
MASCDLDRNSLCKKEEDTRSASPTIEAQGTSPAHDNIAFQDSTSKDKTILNLEAKEEPETIEEHKKEHAS
GDSVVSPLPVTTVKSVNLRQSENTSANEKEVEAEFLRLSLGFKCDWFTLEKRVKLEERSRDLAEENLKKE
ITNCLKLLESLTPLCEDDNQAQEIIKKLEKSIKFLSQCAARVASRAEMLGAINQESRVSKAVEVMIQHVE
NLKRMYAKEHAELEELKQVLLQNERSFNPLEDDDDCQIKKRSASLNSKPSSLRRVTIASLPRNIGNAGMV
AGMENNDRFSRRSSSWRILGSKQSEHRPSLPRFISTYSWADAEEEKCELKTKDDSEPSGEETVERTRKPS
LSEKKNNPSKWDVSSVYDTIASWATNLKSSIRKANKALWLSIAFIVLFAALMSFLTGQLFQKSVDAAPTQ
QEDSWTSLEHILWPFTRLRHNGPPPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH