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Report for CCDS91696.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91696.1 Public Homo sapiens 12 BIN2 24 110 108 CCDS HistoryNCBI Gene:51411Re-query CCDS DB by CCDS ID:91696.1Re-query CCDS DB by GeneID:51411See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91696.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000452142.7 ENSP00000410217.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452142.7Link to Ensembl Protein Viewer:ENSP00000410217.3Re-query CCDS DB by Nucleotide ID:ENST00000452142Re-query CCDS DB by Protein ID:ENSP00000410217
Original member Current member NCBI NM_001290008.2 NP_001276937.2 Accepted alive Link to Nucleotide Sequence:NM_001290008.2Link to Protein Sequence:NP_001276937.2Re-query CCDS DB by Nucleotide ID:NM_001290008Re-query CCDS DB by Protein ID:NP_001276937Link to BLAST:NP_001276937.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276937.2 533 Q9UBW5-2 533 100% 0 0

Chromosomal Locations for CCDS 91696.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 51281499 51281528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51284716 51284787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51288108 51288188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51291591 51292344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51295796 51295878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51297089 51297164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51299203 51299288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51299607 51299714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51302686 51302780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51303087 51303141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51313823 51313903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51324022 51324102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1602 nt):
ATGGCAGAGGGCAAGGCAGGCGGCGCGGCCGGCCTCTTCGCCAAGCAGGTGCAGAAGAAGTTTAGCAGGG
CCCAGGAGAAGGTGCTGCAGAAATTGGGGAAAGCTGTAGAAACCAAAGATGAACGATTTGAACAAAGCGC
TAGCAACTTCTACCAACAACAGGCAGAAGGCCACAAGCTGTACAAGGACCTGAAGAACTTCCTTAGTGCA
GTCAAAGTGATGCATGAAAGTTCAAAAAGAGTGTCAGAAACCCTGCAGGAGATCTACAGCAGCGAGTGGG
ACGGTCATGAGGAGCTGAAGGCCATCGTATGGGAGAGAATTGCCAAGCGGGGTCGGAAACTCGTGGACTA
TGACAGTGCCCGACACCACCTGGAGGCAGTGCAGAATGCCAAGAAGAAAGATGAGGCCAAGACTGCCAAG
GCAGAGGAAGAGTTCAACAAAGCCCAGACTGTGTTTGAAGATCTGAACCAAGAACTACTAGAGGAGCTGC
CTATTCTTTATAATAGTCGTATTGGCTGCTATGTGACCATCTTCCAAAACATTTCCAACTTGAGGGATGT
CTTCTACAGGGAAATGAGCAAGCTGAACCACAATCTCTACGAGGTGATGAGCAAACTGGAGAAGCAACAT
TCCAATAAAGTCTTTGTGGTGAAGGGACTGTCAAGCAGCAGCAGGCGCTCTTTAGTCATTTCTCCCCCAG
TTCGAACAGCTACAGTCTCCAGTCCTCTTACCTCACCTACTAGTCCCTCTACACTTTCCTTGAAGAGTGA
GAGTGAATCTGTCTCAGCAACTGAAGATCTGGCACCTGATGCAGCCCAAGGGGAAGACAATTCTGAGATC
AAGGAGCTCTTAGAAGAGGAGGAAATAGAGAAGGAAGGATCTGAAGCAAGCTCCTCTGAGGAAGATGAGC
CTCTACCAGCCTGCAATGGCCCCGCCCAGGCCCAGCCCTCTCCTACCACTGAAAGGGCCAAGTCCCAGGA
GGAAGTTCTCCCCAGCTCCACAACTCCATCACCAGGCGGAGCCCTGAGCCCTTCAGGGCAGCCTTCATCA
TCTGCCACAGAAGTAGTCCTCCGAACCCGCACCGCAAGTGAAGGATCTGAACAACCAAAGAAGAGAGCCT
CTATCCAGAGGACCTCAGCACCCCCTAGTAGGCCTCCTCCACCCAGAGCCACTGCAAGCCCCAGGCCCTC
CTCAGGGAACATACCTTCCAGCCCTACAGCCTCTGGAGGGGGTTCACCCACCAGCCCTAGGGCCTCCTTG
GGGACTGGGACTGCAAGTCCTAGGACCTCCCTAGAGGTCTCTCCTAATCCAGAACCACCAGAGAAGCCAG
TAAGAACTCCTGAGGCCAAAGAAAATGAAAACATCCACAATCAGAACCCTGAAGAACTTTGTACTTCCCC
CACCTTAATGACATCTCAGGTTGCTTCAGAGCCTGGAGAGGCAAAGAAGATGGAAGACAAGGAAAAGGAT
AATAAGCTTATCTCAGCTAACTCCTCGGAGGGCCAAGACCAGCTTCAAGTCTCCATGGTACCAGAAAACA
ACAACCTCACAGCACCTGAACCTCAAGAAGAGGTATCCACAAGTGAAAATCCACAACTCTGA

Translation (533 aa):
MAEGKAGGAAGLFAKQVQKKFSRAQEKVLQKLGKAVETKDERFEQSASNFYQQQAEGHKLYKDLKNFLSA
VKVMHESSKRVSETLQEIYSSEWDGHEELKAIVWERIAKRGRKLVDYDSARHHLEAVQNAKKKDEAKTAK
AEEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQNISNLRDVFYREMSKLNHNLYEVMSKLEKQH
SNKVFVVKGLSSSSRRSLVISPPVRTATVSSPLTSPTSPSTLSLKSESESVSATEDLAPDAAQGEDNSEI
KELLEEEEIEKEGSEASSSEEDEPLPACNGPAQAQPSPTTERAKSQEEVLPSSTTPSPGGALSPSGQPSS
SATEVVLRTRTASEGSEQPKKRASIQRTSAPPSRPPPPRATASPRPSSGNIPSSPTASGGGSPTSPRASL
GTGTASPRTSLEVSPNPEPPEKPVRTPEAKENENIHNQNPEELCTSPTLMTSQVASEPGEAKKMEDKEKD
NKLISANSSEGQDQLQVSMVPENNNLTAPEPQEEVSTSENPQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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