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Report for CCDS91892.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91892.1 Public Homo sapiens 14 SRSF5 24 110 108 CCDS HistoryNCBI Gene:6430Re-query CCDS DB by CCDS ID:91892.1Re-query CCDS DB by GeneID:6430See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91892.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000554021.1 ENSP00000450918.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554021.1Link to Ensembl Protein Viewer:ENSP00000450918.1Re-query CCDS DB by Nucleotide ID:ENST00000554021Re-query CCDS DB by Protein ID:ENSP00000450918
Original member Current member EBI ENST00000555547.5 ENSP00000474409.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555547.5Link to Ensembl Protein Viewer:ENSP00000474409.1Re-query CCDS DB by Nucleotide ID:ENST00000555547Re-query CCDS DB by Protein ID:ENSP00000474409
Current member NCBI NM_001411040.1 NP_001397969.1 Accepted alive Link to Nucleotide Sequence:NM_001411040.1Link to Protein Sequence:NP_001397969.1Re-query CCDS DB by Nucleotide ID:NM_001411040Re-query CCDS DB by Protein ID:NP_001397969Link to BLAST:NP_001397969.1

Chromosomal Locations for CCDS 91892.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 69768157 69768282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69768604 69768674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69768798 69768896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69769182 69769251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69769511 69769561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (417 nt):
ATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCCAGCGGCCAGGGAGAAGGACGTGGAAAGATTCT
TCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAGGCTTTGGTTTTGTGGAATTTGAGGATCC
AAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTCTGTAGTGAAAGGGTTACTATTGAA
CATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGACCGTTTTAGTAGTCGCAGAC
CTCGAAATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAGTTGAGAATTTATCCTC
AAGAGTCAGCTGGCAGCCTGTCTGTGTCGTTGGCCTTATGACGAGGAGTGCCTGTGGGTTATCCTAA

Translation (138 aa):
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIE
HARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQPVCVVGLMTRSACGLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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